MirGeneDB 3.0
MirGeneDB ID

Lpo-Iab-4-P3

Family name IAB-4 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Iab-4-P3-as  Lpo-Iab-4-P4  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666418.1: 83535-83594 [-] Ensembl
Clustered miRNAs
(< 50kb from Iab-4-P3)		 Iab-4-P3 NW_013666418.1: 83535-83594 [-] Ensembl
Iab-4-P3-as NW_013666418.1: 83536-83596 [+] Ensembl
Seed CGUAUAC
Precursor
(pre-Mir +30nt flank)		 
AACGGUGUGAAGUAUGGUAGAGACUCCUGCUCGUAUACUGACUGUAUCCUGAGUUUUAUUUACUUUCCGGUAUACCUUCAGUAUACGUAGCAGGCGACUCUAGUUUCGUCCAGAAGAGCC
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Structure
        10         20        30         40         50         
AACGGUGUGAAGUAUGG-     ACU      -          CU    -| U  GUUUUA 
                  UAGAG   CCUGCU CGUAUACUGA  GUAU CC GA      \
                  AUCUC   GGACGA GCAUAUGACU  CAUA GG CU      U
CCGAGAAGACCUGCUUUG     AGC      U          UC    U^ C  UUCAUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Mature sequence

Lpo-Iab-4-P3_5p
mirBase accessionNone
Sequence 
0- UCGUAUACUGACUGUAUCCUGA -22
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Star sequence

Lpo-Iab-4-P3_3p* (predicted)
mirBase accessionNone
Sequence 
38- GGUAUACCUUCAGUAUACGUAG -60
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