MirGeneDB 2.1
MirGeneDB ID

Lpo-Iab-4-P4

Family name IAB-4 (all species)
Seed CGUAUAC
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Iab-4-P3  Lpo-Iab-4-P3-as  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as 
Orthologues Bge-Iab-4  Dan-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665793.1: 590939-590998 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUUCCGCAGCUAUGUUAGAGACUCCAGCUCGUAUACUGAUAGUAUCCUGAGUUGAAAUUACUUUCCGGUAUACCUUCAGUAUACGUAGCAGGCGACUCUACUUCUCGUCGAUGGUUGU
Get precursor sequence
Structure
        10         20        30         40         50         
AGUUUCCGCAGCUAUGU-     ACU  A   -          UA    -| U  GUUGAA 
                  UAGAG   CC GCU CGUAUACUGA  GUAU CC GA      \
                  AUCUC   GG CGA GCAUAUGACU  CAUA GG CU      A
UGUUGGUAGCUGCUCUUC     AGC  A   U          UC    U^ C  UUCAUU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Iab-4-P4_5p
mirBase accessionNone
Sequence 
0- UCGUAUACUGAUAGUAUCCUGA -22
Get sequence
Star sequence

Lpo-Iab-4-P4_3p* (predicted)
mirBase accessionNone
Sequence 
38- GGUAUACCUUCAGUAUACGUAG -60
Get sequence