MirGeneDB 3.0
MirGeneDB ID

Lpo-Iab-4-P5-as

Family name IAB-4 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Iab-4-P3  Lpo-Iab-4-P3-as  Lpo-Iab-4-P4  Lpo-Iab-4-P5 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013675054.1: 13732-13790 [+] Ensembl
Clustered miRNAs
(< 50kb from Iab-4-P5-as)		 Iab-4-P5 NW_013675054.1: 13731-13788 [-] Ensembl
Iab-4-P5-as NW_013675054.1: 13732-13790 [+] Ensembl
Seed ACGUAUA
Precursor
(pre-Mir +30nt flank)		 
UUCUUCCUGACGUAAAUGCAAGUCGCUAGCUACGUAUACUGAAGGUGUACCGGAAAGUUUUACACUCAGGAUACAUUCAGUAUACGAACUAGAGACUUCUUCAAUCCUCUCUCCAUCUC
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Structure
        10          20        30        40        50          
UUCUUCCUGACGUAAAUGC--|    G    CUA           G    A  G  AAGUU 
                     AAGUC CUAG   CGUAUACUGAA GUGU CC GA     \
                     UUCAG GAUC   GCAUAUGACUU CAUA GG CU     U
CUCUACCUCUCUCCUAACUUC^    A    AA-           A    -  A  CACAU 
       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Mature sequence

Lpo-Iab-4-P5-as_5p
mirBase accessionNone
Sequence 
0- UACGUAUACUGAAGGUGUACCGGA -24
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Co-mature sequence

Lpo-Iab-4-P5-as_3p
mirBase accessionNone
Sequence 
37- AGGAUACAUUCAGUAUACGAAC -59
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