Iab-4-as

MirGeneDB ID

Hme-Iab-4-as

Family name

IAB-4 (all species)

Species

Longwing butterfly (Heliconius melpomene)

MiRBase ID

Paralogues

Hme-Iab-4

Orthologues

Aga-Iab-4 Aga-Iab-4-as Bge-Iab-4 Bge-Iab-4-as Dan-Iab-4 Dan-Iab-4-as Dlo-Iab-4 Dlo-Iab-4-as Dma-Iab-4 Dme-Iab-4 Dme-Iab-4-as Dmo-Iab-4 Dmo-Iab-4-as Dpu-Iab-4 Dpu-Iab-4-as Dsi-Iab-4 Dsi-Iab-4-as Dya-Iab-4 Dya-Iab-4-as Gpa-Iab-4 Isc-Iab-4 Tca-Iab-4 Tca-Iab-4-as

Node of Origin (locus)

Pancrustacea

Node of Origin (family)

Arthropoda

Genome context
(Hmel_1)

HE667775: 54413-54475 [+] Ensembl

Clustered miRNAs
(< 50kb from Iab-4-as)

Iab-4 HE667775: 54413-54472 [-] Ensembl
Iab-4-as HE667775: 54413-54475 [+] Ensembl

Seed

UACGUAU

Precursor
(pre-Mir +30nt flank)

UCUUCGCACGGUGAUCAGUGUCAUCUUCUGUUACGUAUACUGAAGGUAUACCGGAAAGAAUGAGACACUCAGGAUACAUUCAGUAUACGUACAGAAGGCGACGCGUAAUCUUCAUUUGCCGCG

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Structure

        10          20        30        40        50        60  
UCUUCGCACGGUGAUCA--|    AU       U            G    A  G  AAGAAU 
                   GUGUC  CUUCUGU ACGUAUACUGAA GUAU CC GA      \
                   CGCAG  GAAGACA UGCAUAUGACUU CAUA GG CU      G
GCGCCGUUUACUUCUAAUG^    CG       -            A    -  A  CACAGA 
 120       110       100         90        80         70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Fe	Fe	Fe	Fe	Ma	Ma

Mature sequence

Hme-Iab-4-as_5p

mirBase accession

None

Sequence

0- UUACGUAUACUGAAGGUAUACCGGA -25

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Star sequence

Hme-Iab-4-as_3p*

mirBase accession

None

Sequence

40- AGGAUACAUUCAGUAUACGUACA -63

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