MirGeneDB 3.0
MirGeneDB ID

Dpu-Iab-4-as

Family name IAB-4 (all species)
Species Common water flea (Daphnia pulex)
MiRBase ID
Paralogues Dpu-Iab-4 
Orthologues Aga-Iab-4  Aga-Iab-4-as  Bge-Iab-4  Bge-Iab-4-as  Dan-Iab-4  Dan-Iab-4-as  Dlo-Iab-4  Dlo-Iab-4-as  Dma-Iab-4  Dme-Iab-4  Dme-Iab-4-as  Dmo-Iab-4  Dmo-Iab-4-as  Dsi-Iab-4  Dsi-Iab-4-as  Dya-Iab-4  Dya-Iab-4-as  Gpa-Iab-4  Hme-Iab-4  Hme-Iab-4-as  Isc-Iab-4  Tca-Iab-4  Tca-Iab-4-as 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Arthropoda
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_7: 515544-515604 [-] Ensembl
Clustered miRNAs
(< 50kb from Iab-4-as)		 Iab-4-as DAPPUscaffold_7: 515544-515604 [-] Ensembl
Iab-4 DAPPUscaffold_7: 515547-515604 [+] Ensembl
Seed GGAUACA
Precursor
(pre-Mir +30nt flank)		 
AUUGUAAUUUGUUGAAAGUGUUGCCUCCUGUUACGUAUACUGAAGGUAUACCGGAAUGAAUGAAGCUCAGGAUACAUUCAGUAUACGUCCAGGGGGUUAAACAUCCAGUCGACCGAGUCGU
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Structure
        10          20        30        40        50        60 
AUUGUAAUUUGUUGAAA--| GUU        UU            G    A  GGAAUGAA 
                   GU   GCCUCCUG  ACGUAUACUGAA GUAU CC        \
                   CA   UGGGGGAC  UGCAUAUGACUU CAUA GG        U
UGCUGAGCCAGCUGACCUA^ AAU        C-            A    -  ACUCGAAG 
 .       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Dpu-Iab-4-as_5p*
mirBase accessionNone
Sequence 
0- UUACGUAUACUGAAGGUAUACCGG -24
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Mature sequence

Dpu-Iab-4-as_3p
mirBase accessionNone
Sequence 
38- AGGAUACAUUCAGUAUACGUCCA -61
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