MirGeneDB 3.0

MirGeneDB ID

Dlo-Iab-4-as

Family name IAB-4 (all species)
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Iab-4 
Orthologues Aga-Iab-4  Aga-Iab-4-as  Bge-Iab-4  Bge-Iab-4-as  Dan-Iab-4  Dan-Iab-4-as  Dma-Iab-4  Dme-Iab-4  Dme-Iab-4-as  Dmo-Iab-4  Dmo-Iab-4-as  Dpu-Iab-4  Dpu-Iab-4-as  Dsi-Iab-4  Dsi-Iab-4-as  Dya-Iab-4  Dya-Iab-4-as  Gpa-Iab-4  Hme-Iab-4  Hme-Iab-4-as  Isc-Iab-4  Tca-Iab-4  Tca-Iab-4-as 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Arthropoda
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087226.1: 4752788-4752849 [+] Ensembl
Clustered miRNAs
(< 50kb from Iab-4-as)
Iab-4 NC_087226.1: 4752788-4752845 [-] Ensembl
Iab-4-as NC_087226.1: 4752788-4752849 [+] Ensembl
Seed UACGUAU
Precursor
(pre-Mir +30nt flank)
AAGAUCAUCGUCGAUCGGUGUAGCCUCCUGUUACGUAUACUGAAGGUAUACCGGACAGGAUUACACUCAGGAUACAUUCAGUAUACGUACAGGGGGCUUCACAUCACUCAUCAGAGAAGAAC
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Structure
        10           20        30        40        50        60 
AAGAUCAUCGUCGAUCG---|  U          U            G    A CGGACAGGA 
                    GUG AGCCUCCUGU ACGUAUACUGAA GUAU C         \
                    CAC UCGGGGGACA UGCAUAUGACUU CAUA G         U
CAAGAAGAGACUACUCACUA^  U          -            A    - GACUCACAU 
120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sr Sr
Mature sequence

Dlo-Iab-4-as_5p

mirBase accessionNone
Sequence
0- UUACGUAUACUGAAGGUAUAC -21
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Star sequence

Dlo-Iab-4-as_3p*

mirBase accessionNone
Sequence
41- AUACAUUCAGUAUACGUACAG -62
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