MirGeneDB 3.0

MirGeneDB ID

Csc-Iab-4-P7

Family name IAB-4 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Iab-4-P6  Csc-Iab-4-P6-as  Csc-Iab-4-P7-as 
Orthologues Aga-Iab-4  Bge-Iab-4  Dan-Iab-4  Dlo-Iab-4  Dma-Iab-4  Dme-Iab-4  Dmo-Iab-4  Dpu-Iab-4  Dsi-Iab-4  Dya-Iab-4  Gpa-Iab-4  Hme-Iab-4  Isc-Iab-4  Tca-Iab-4 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Arthropoda
Genome context
(GCF_000671375.1_CSC)
NW_019384783.1: 169684-169743 [+] Ensembl
Clustered miRNAs
(< 50kb from Iab-4-P7)
Iab-4-P7-as NW_019384783.1: 169682-169742 [-] Ensembl
Iab-4-P7 NW_019384783.1: 169684-169743 [+] Ensembl
Seed CGUAUAC
Precursor
(pre-Mir +30nt flank)
AAAGAUGGUUAACAUAGCAAUGCCUCCUGUUCGUAUACUGAAUGUAUCCUGAGUUAAUUUUACUUUCCGGUAUACCUUCAGUAUACGUAGCAGGAGACACUGAGCUCUCAUCGAUCCUCC
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Structure
        10         20        30         40         50         
AAAGAUGGUUAACAUAG-  A  C        -           U    -| U  GUUAAU 
                  CA UG CUCCUGUU CGUAUACUGAA GUAU CC GA      \
                  GU AC GAGGACGA GCAUAUGACUU CAUA GG CU      U
CCUCCUAGCUACUCUCGA  C  A        U           C    U^ C  UUCAUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Iab-4-P7_5p

mirBase accessionNone
Sequence
0- UCGUAUACUGAAUGUAUCCUGA -22
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Star sequence

Csc-Iab-4-P7_3p* (predicted)

mirBase accessionNone
Sequence
38- GGUAUACCUUCAGUAUACGUAG -60
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