MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-2-P5

Family name MIR-2 (all species)
Seed AAGGAAC
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-5
Paralogues Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Dya-Mir-2-P3a  Dya-Mir-2-P3b  Dya-Mir-2-P4a-v1  Dya-Mir-2-P4a-v2  Dya-Mir-2-P4b-v1  Dya-Mir-2-P4b-v2  Dya-Mir-2-P6a  Dya-Mir-2-P6b  Dya-Mir-2-P6c  Dya-Mir-2-P7  Dya-Mir-2-P8  Dya-Mir-2-P9-v1  Dya-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P5a  Aae-Mir-2-P5b  Cel-Mir-2-o5  Dan-Mir-2-P5  Dme-Mir-2-P5  Dmo-Mir-2-P5  Dsi-Mir-2-P5 
Node of Origin (locus) Drosophila
Node of Origin (family) Protostomia
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2R: 13624064-13624124 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P5)
Mir-3-P2 2R: 13623513-13623571 [+] UCSC Ensembl
Mir-3-P1 2R: 13623628-13623684 [+] UCSC Ensembl
Mir-279-P2 2R: 13623775-13623848 [+] UCSC Ensembl
Mir-9-P9 2R: 13623927-13623983 [+] UCSC Ensembl
Mir-2-P5 2R: 13624064-13624124 [+] UCSC Ensembl
Mir-2-P6a 2R: 13624211-13624273 [+] UCSC Ensembl
Mir-2-P6b 2R: 13624349-13624410 [+] UCSC Ensembl
Mir-2-P6c 2R: 13624497-13624562 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUCCCCCAAUUUAACGGGCCGUUCGCUAAAAGGAACGAUCGUUGUGAUAUGCGUUAUUCCCUAACAUAUCACAGUGAUUUUCCUUUAUAACGCAUGUACAAAGUCCACAACUCAUCAAG
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Structure
        10        20          30         40        50          
UGUUCCCCCAAUUUAACGGGC--   U  C  -|      C               CGUUAU 
                       CGU CG UA AAAGGAA GAUCGUUGUGAUAUG      \
                       GUA GC AU UUUCCUU UUAGUGACACUAUAC      U
GAACUACUCAACACCUGAAACAU   C  A  A^      -               AAUCCC 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-2-P5_5p

mirBase accessionMIMAT0009101
Sequence
0- AAAGGAACGAUCGUUGUGAUAUG -23
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Star sequence

Dya-Mir-2-P5_3p*

mirBase accessionNone
Sequence
38- UAUCACAGUGAUUUUCCUUUAUA -61
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