MirGeneDB ID | Dya-Mir-2-P8 |
Family name |
MIR-2 (all species) |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
dya-mir-308
|
Paralogues |
Dya-Mir-2-P1-v1
Dya-Mir-2-P2a
Dya-Mir-2-P2b1
Dya-Mir-2-P2b2
Dya-Mir-2-P3a
Dya-Mir-2-P3b
Dya-Mir-2-P4a-v1
Dya-Mir-2-P4b-v1
Dya-Mir-2-P5
Dya-Mir-2-P6a
Dya-Mir-2-P6b
Dya-Mir-2-P6c
Dya-Mir-2-P7
Dya-Mir-2-P9-v1
|
Orthologues |
Aae-Mir-2-P8
Aga-Mir-2-P8
Asu-Mir-2-o8
Dan-Mir-2-P8
Dme-Mir-2-P8-v1
Dmo-Mir-2-P8
Dsi-Mir-2-P8
Gpa-Mir-2-P8
Gsp-Mir-2
Hme-Mir-2-P8
Ple-Mir-2
Tca-Mir-2-P8
|
Node of Origin (locus) |
Aparaglossata
|
Node of Origin (family) |
Protostomia
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2R: 10041147-10041207 [-]
UCSC
Ensembl
|
Seed |
AUCACAG |
Precursor (pre-Mir +30nt flank) |
AGAUGGGGGGAAUCACACGUCUCGACGCCUCGCAGUAUAUUUUUGUGUUUUGUUUCCUUUUGCAACUCAAAUCACAGGAUUAUACUGUGAGAUGACCAGCGUGCCAGCAGCAGAAAGUGAC
Get precursor sequence
|
Structure | 10 20 30 40 50
AGAUGGGGGGAAUCACACGUCUCG -------| U U UUUCCUU
ACGC CUCGCAGUAUA UUUUGUG UUUG \
UGCG GAGUGUCAUAU AGGACAC AAAC U
CAGUGAAAGACGACGACCG----- ACCAGUA^ U U UCAACGU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dya-Mir-2-P8_5p* |
mirBase accession | None |
Sequence |
0- CGCAGUAUAUUUUUGUGUUUUG -22
Get sequence
|
Mature sequence |
Dya-Mir-2-P8_3p |
mirBase accession | MIMAT0009100 |
Sequence |
39- AAUCACAGGAUUAUACUGUGAG -61
Get sequence
|