MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-2-P5

Family name MIR-2 (all species)
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-2-P1-v1  Dlo-Mir-2-P2a  Dlo-Mir-2-P2b  Dlo-Mir-2-P3-v1  Dlo-Mir-2-P7 
Orthologues Aae-Mir-2-P5a  Aae-Mir-2-P5b  Aga-Mir-2-P5a1  Aga-Mir-2-P5a2  Aga-Mir-2-P5b  Cel-Mir-2-o5  Dan-Mir-2-P5  Dma-Mir-2-P5  Dme-Mir-2-P5  Dmo-Mir-2-P5  Dpu-Mir-2-P5  Dsi-Mir-2-P5  Dya-Mir-2-P5  Gpa-Mir-2-P5-v1  Gsp-Mir-2  Ple-Mir-2  Tca-Mir-2-P5c  Tca-Mir-2-P5d  Tca-Mir-2-P5e 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087241.1: 4525982-4526042 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P5)		 Mir-3 NC_087241.1: 4525806-4525867 [-] Ensembl
Mir-2-P5 NC_087241.1: 4525982-4526042 [-] Ensembl
Mir-9-P9 NC_087241.1: 4526129-4526188 [-] Ensembl
Mir-279-P1 NC_087241.1: 4526260-4526323 [-] Ensembl
Mir-36 NC_087241.1: 4526388-4526443 [-] Ensembl
Mir-3478 NC_087241.1: 4526391-4526444 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AAAAUUGUUUUCAAACAAUCGUUGGGGUUUCGAAGAACUUGAGCAGUGAUUUGUUAUAUAUAAAUCCAUAUCACAGCACAAGUUACUUCAAACUUUGCGAUUUCAAACAUCGAUACUCUCC
Get precursor sequence
Structure
        10           20        30         40        50          
AAAAUUGUUUUCAAACA---|   U GG     C    -      A  A     U  UUAUAU 
                    AUCG U  GGUUU GAAG AACUUG GC GUGAU UG      \
                    UAGC G  UCAAA CUUC UUGAAC CG CACUA AC      A
CCUCUCAUAGCUACAAACUU^   - UU     -    A      A  A     U  CUAAAU 
 .       110       100         90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sr Sr
Star sequence

Dlo-Mir-2-P5_5p*
mirBase accessionNone
Sequence 
0- CGAAGAACUUGAGCAGUGAUUUG -23
Get sequence
Mature sequence

Dlo-Mir-2-P5_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCACAAGUUACUUCAA -61
Get sequence