MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-3478

Family name MIR-3478 (all species)
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. longicaudata
Node of Origin (family) D. longicaudata
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087241.1: 4526391-4526444 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-3478)		 Mir-3 NC_087241.1: 4525806-4525867 [-] Ensembl
Mir-2-P5 NC_087241.1: 4525982-4526042 [-] Ensembl
Mir-9-P9 NC_087241.1: 4526129-4526188 [-] Ensembl
Mir-279-P1 NC_087241.1: 4526260-4526323 [-] Ensembl
Mir-36 NC_087241.1: 4526388-4526443 [-] Ensembl
Mir-3478 NC_087241.1: 4526391-4526444 [+] Ensembl
Seed ACACCGG
Precursor
(pre-Mir +30nt flank)		 
UUUGCCCGGGUGAUAAGGAACCAAUAUUGGAUGAAUCCUACCCGGUGAGGCUUCCAUUACCCCACACCGGACAAGAUUACAUCCGACAGCAGUCUCCUCGACGAUAAUUUCCUU
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Structure
        10        20          30         40        50      
UUUGCCCGGGUGAUAAGGAACCAAUA--       -|   CUAC      A  CUUCC 
                            UUGGAUG AAUC    CCGGUG GG     \
                            AGCCUAC UUAG    GGCCAC CC     A
UUCCUUUAAUAGCAGCUCCUCUGACGAC       A^   AACA      A  CCAUU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Sr Sr
Star sequence

Dlo-Mir-3478_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUGAAUCCUACCCGGUGAGGCU -22
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Mature sequence

Dlo-Mir-3478_3p
mirBase accessionNone
Sequence 
32- CACACCGGACAAGAUUACAUCC -54
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