MirGeneDB 2.1
MirGeneDB ID

Dre-Let-7-P2b1a

Family name LET-7 (all species)
Seed GAGGUAG
Species Zebrafish (Danio rerio)
MiRBase ID dre-let-7f
Paralogues Dre-Let-7-P1b1  Dre-Let-7-P1b2  Dre-Let-7-P1c1  Dre-Let-7-P1c2  Dre-Let-7-P1d1  Dre-Let-7-P1d2  Dre-Let-7-P2a1a  Dre-Let-7-P2a2a  Dre-Let-7-P2a2b  Dre-Let-7-P2a3a  Dre-Let-7-P2a3b  Dre-Let-7-P2a4a  Dre-Let-7-P2a4b  Dre-Let-7-P2b2a  Dre-Let-7-P2b2b  Dre-Let-7-P2b3a  Dre-Let-7-P2b4a  Dre-Let-7-P2b4b  Dre-Let-7-P2c2b  Dre-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2b1  Ami-Let-7-P2b1  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b1  Cfa-Let-7-P2b1  Cgi-Let-7  Cli-Let-7-P2b1  Cpi-Let-7-P2b1  Cpo-Let-7-P2b1  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b1  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b1  Gga-Let-7-P2b1  Gja-Let-7-P2b1  Gmo-Let-7-P2b1a  Hme-Let-7  Hsa-Let-7-P2b1  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2b1  Lgi-Let-7  Loc-Let-7-P2b1  Mal-Let-7-P2b1a  Mdo-Let-7-P2b1  Mml-Let-7-P2b1  Mmu-Let-7-P2b1  Mun-Let-7-P2b1  Npo-Let-7  Oan-Let-7-P2b1  Obi-Let-7  Ocu-Let-7-P2b1  Ovu-Let-7  Pbv-Let-7-P2b1  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b1  Sha-Let-7-P2b1  Sko-Let-7  Spt-Let-7-P2b1  Spu-Let-7  Tca-Let-7  Tgu-Let-7-P2b1  Xbo-Let-7 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr11: 27503037-27503113 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P2b1a)		 Let-7-P2b1a chr11: 27503037-27503113 [-] UCSC Ensembl
Let-7-P2a1a chr11: 27503240-27503310 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUAUUUACAUGGUAAUGCUUGUGCAGUGUGAGGUAGUAGAUUGUAUAGUUGUAGGGUAGUGAUUUUAUCCUGUGUAGAAGAUAACUAUACAAUCUAUUGCCUUCCCUGAGGGGCAGAAAUACACAGAAAAGGAAU
Get precursor sequence
Structure
        10           20        30        40        50        60        
GCUUAUUUACAUGGUAA---|    GUG   UGU                     GUAGGGUAGUGAUUU 
                    UGCUU   CAG   GAGGUAGUAGAUUGUAUAGUU               U
                    ACGGG   GUC   UUCCGUUAUCUAACAUAUCAA               A
UAAGGAAAAGACACAUAAAG^    GA-   CC-                     UAGAAGAUGUGUCCU 
     130       120        110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Let-7-P2b1a_5p
mirBase accessionMIMAT0001764
Sequence 
0- UGAGGUAGUAGAUUGUAUAGUU -22
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Proposed targets TargetScanFish: dre-let-7f
Star sequence

Dre-Let-7-P2b1a_3p*
mirBase accessionNone
Sequence 
56- CUAUACAAUCUAUUGCCUUCC -77
Get sequence