MirGeneDB 3.0
55 Xenoturbella bocki microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To To To
Xbo-Let-7 None LET-7 GAGGUAG None None scaffold1218 11314 11379 - Bilateria Bilateria Unknown 1
Xbo-Mir-1 None MIR-1 GGAAUGU None None scaffold10079 30859 30918 - Bilateria Bilateria No 1 1
Xbo-Mir-7 None MIR-7 GGAAGAC None None C11615513 81 141 - Bilateria Bilateria Unknown 1
Xbo-Mir-9 None MIR-9 CUUUGGU None None scaffold1423 24861 24921 - Bilateria Bilateria No 1
Xbo-Mir-10-P1 None MIR-10 ACCCUGU None None scaffold4397 33024 33083 + Bilateria Eumetazoa Unknown 1
Xbo-Mir-10-P2 None MIR-10 ACCCGUA None None scaffold1218 13471 13529 - Bilateria Eumetazoa Unknown
Xbo-Mir-10-P2-as None MIR-10 CCCUUAG None None scaffold1218 13474 13530 + X. bocki Eumetazoa Unknown
Xbo-Mir-10-P3 None MIR-10 CAGGGUU None None scaffold1218 5011 5069 - Bilateria Eumetazoa No 1 1
Xbo-Mir-22-P2d None MIR-22 CAGCUCC None None scaffold4579 31173 31233 + X. bocki Bilateria No 1
Xbo-Mir-22-P2e None MIR-22 CAGCUCC None None scaffold1487 40588 40647 + X. bocki Bilateria No 1 1
Xbo-Mir-29-P1 None MIR-29 AGCACCA None None scaffold1822 81450 81510 - Bilateria Bilateria No 1 1
Xbo-Mir-29-P2 None MIR-29 AGCACCA None None C11512832 94 152 - Bilateria Bilateria No 1 1
Xbo-Mir-31 None MIR-31 GGCAAGA None None scaffold1506 23204 23263 + Bilateria Bilateria No 1
Xbo-Mir-33 None MIR-33 UGCAUUG None None scaffold893 68498 68555 + Bilateria Bilateria Unknown 1 1 1
Xbo-Mir-34-P25a None MIR-34 GGCAGUG None None scaffold1430 17979 18038 + X. bocki Bilateria Unknown 1 1
Xbo-Mir-34-P25b None MIR-34 GGCAGUG None None scaffold1430 18761 18820 + X. bocki Bilateria Unknown 1 1
Xbo-Mir-92-o86 None MIR-92 AUUGCAC None None scaffold1212 17028 17087 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o87 None MIR-92 ACUGCAC None None scaffold1212 23646 23707 + X. bocki Bilateria None 1
Xbo-Mir-92-o88 xbo-mir-92a MIR-92 AUUGCAC None MIMAT0020118 scaffold1212 24644 24704 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o89 xbo-mir-92b MIR-92 ACUGCAC None MIMAT0020125 scaffold1212 25094 25154 + X. bocki Bilateria None 1 1
Xbo-Mir-92-o90 None MIR-92 AUUGCAC None None scaffold1212 25425 25485 + X. bocki Bilateria None 1 1 1
Xbo-Mir-92-o91 None MIR-92 AUUGCAC None None scaffold1212 25619 25678 + X. bocki Bilateria None
Xbo-Mir-96-P1 None MIR-96 UUGGCAC None None scaffold1822 63524 63583 + Bilateria Bilateria Unknown
Xbo-Mir-103 xbo-mir-2013 MIR-103 GCAGCAU None MIMAT0020119 scaffold9008 359 418 + Bilateria Bilateria No 1 1
Xbo-Mir-124 xbo-mir-124 MIR-124 AAGGCAC None MIMAT0020120 scaffold882 29067 29127 - Bilateria Bilateria Unknown
Xbo-Mir-133 None MIR-133 UUGGUCC None None scaffold10079 29259 29318 - Bilateria Bilateria Unknown 1 1
Xbo-Mir-137 xbo-mir-137 MIR-137 UAUUGCU None MIMAT0020121 scaffold3742 16718 16777 + Bilateria Bilateria No
Xbo-Mir-153 None MIR-153 UGCAUAG None None scaffold1972 13412 13472 - Bilateria Bilateria No 1 1 1
Xbo-Mir-190 None MIR-190 GAUAUGU None None scaffold3234 17938 17996 - Bilateria Bilateria No 1 1
Xbo-Mir-193-P1 None MIR-193 AAGAUUU None None scaffold565 13743 13799 + Bilateria Bilateria No 1
Xbo-Mir-193-P2 None MIR-193 AAUGCCC None None scaffold565 15785 15843 + Bilateria Bilateria No 1
Xbo-Mir-210-P19 None MIR-210 GUGGCUU None None scaffold1007 23015 23077 + X. bocki Bilateria No 1 1
Xbo-Mir-210-P20 None MIR-210 UGUGCGU None None scaffold1007 23177 23237 + X. bocki Bilateria No 1
Xbo-Mir-219 xbo-mir-219 MIR-219 GAACUGU MIMAT0020122 None scaffold8826 31999 32059 + Bilateria Bilateria No
Xbo-Mir-252-P1g None MIR-252 UAAGUAG None None scaffold836 42917 42972 - X. bocki Bilateria No 1 1
Xbo-Mir-252-P1h None MIR-252 UAAGUAG None None C11412710 13 72 + X. bocki Bilateria None 1
Xbo-Mir-252-P1i None MIR-252 UAAGUAG None None C11653000 21 81 + X. bocki Bilateria No
Xbo-Mir-252-P1j None MIR-252 UAAGUAG None None C11610419 45 105 - X. bocki Bilateria Unknown
Xbo-Mir-252-P2 None MIR-252 UAAGUAC None None scaffold836 41595 41649 - Bilateria Bilateria No 1
Xbo-Mir-278 None MIR-278 CGGUGGG None None scaffold3821 41110 41168 + Bilateria Bilateria No 1
Xbo-Mir-2001 None MIR-2001 UGUGACC None None scaffold836 44083 44141 - Bilateria Bilateria No
Xbo-Mir-12495 None MIR-12495 UUAGCUU None None scaffold1990 75648 75707 - Xenacoelomorpha Xenacoelomorpha No 1 1
Xbo-Mir-12496 None MIR-12496 UGUGCAU None None scaffold1007 24070 24129 + Xenacoelomorpha Xenacoelomorpha No 1 1
Xbo-Novel-1 None XBO-NOVEL-1 GAUGACA None None scaffold537 80030 80088 + X. bocki X. bocki No 1
Xbo-Novel-2 None XBO-NOVEL-2 GCCGUCU None None scaffold2339 30693 30755 - X. bocki X. bocki No 1 1
Xbo-Novel-3 None XBO-NOVEL-3 UUGGUUC None None scaffold2322 15707 15765 - X. bocki X. bocki No 1 1
Xbo-Novel-4 None XBO-NOVEL-4 GUAGGGU None None scaffold1578 18888 18946 - X. bocki X. bocki No 1 1
Xbo-Novel-5 None XBO-NOVEL-5 GCGGUAG None None scaffold679 46590 46647 - X. bocki X. bocki No 1
Xbo-Novel-6 None XBO-NOVEL-6 GCUGAAA None None None None None None X. bocki X. bocki No
Xbo-Novel-7 None XBO-NOVEL-7 CACCUUG None None scaffold8278 414 474 + X. bocki X. bocki No 1 1
Xbo-Novel-8 None XBO-NOVEL-8 CGUAUUC None None scaffold12462 3634 3694 + X. bocki X. bocki No 1 1 1
Xbo-Novel-9 None XBO-NOVEL-9 AUACAUC None None scaffold628 118237 118291 - X. bocki X. bocki No 1
Xbo-Novel-10 None XBO-NOVEL-10 CAGCAUU None None scaffold9008 686 745 + X. bocki X. bocki No 1
Xbo-Novel-11 None XBO-NOVEL-11 GCCUAGG None None scaffold938 39028 39088 + X. bocki X. bocki No 1
Xbo-Novel-12 None XBO-NOVEL-12 CACCCUA None None scaffold9784 4290 4351 - X. bocki X. bocki No 1

(red - mature/co-mature, blue - star)

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