Mir
Gene
DB
2.1
Home
Browse
Search
Download
Information
47 microRNA genes with seed UAAAGCU
Sort by genome coordinates
▼
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Dme-Mir-9-P12-v2
dme-mir-79
MIR-9
UAAAGCU
MIMAT0020814
MIMAT0000352
2L
16698572
16698634
+
Diptera
Bilateria
No
Dsi-Mir-9-P12-v2
None
MIR-9
UAAAGCU
None
None
2L
16226326
16226388
+
Diptera
Bilateria
No
Dme-Mir-9-P9
dme-mir-4
MIR-9
UAAAGCU
MIMAT0020785
MIMAT0000109
2R
19661300
19661356
-
Drosophila
Bilateria
No
1
Dsi-Mir-9-P9
dsi-mir-4
MIR-9
UAAAGCU
None
MIMAT0008842
2R
16151148
16151204
-
Drosophila
Bilateria
No
1
Dya-Mir-9-P9
dya-mir-4
MIR-9
UAAAGCU
None
MIMAT0009058
2R
13623927
13623983
+
Drosophila
Bilateria
No
1
Dya-Mir-9-P12-v2
dya-mir-79
MIR-9
UAAAGCU
None
MIMAT0009124
2R
4404435
4404497
-
Diptera
Bilateria
No
Hsa-Mir-9-P3
hsa-mir-9-1
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr1
156420353
156420414
-
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P2
mmu-mir-9-2
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr13
83738821
83738880
+
Gnathostomata
Bilateria
No
1
1
Hsa-Mir-9-P1
hsa-mir-9-3
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr15
89368032
89368093
+
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P3
mmu-mir-9-1
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr3
88215613
88215674
+
Gnathostomata
Bilateria
No
1
1
Hsa-Mir-9-P2
hsa-mir-9-2
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr5
88666865
88666924
-
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P1
mmu-mir-9-3
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr7
79505279
79505340
+
Gnathostomata
Bilateria
No
1
1
Cel-Mir-9-P15
cel-mir-79
MIR-9
UAAAGCU
MIMAT0020322
MIMAT0000051
chrI
9332964
9333027
+
Caenorhabditis
Bilateria
No
Cel-Mir-9-P14
cel-mir-75
MIR-9
UAAAGCU
MIMAT0015108
MIMAT0000047
chrX
2372475
2372534
+
Caenorhabditis
Bilateria
No
Esc-Mir-9
None
MIR-9
CUUUGGU
None
None
Esc-Mir-9_pre_SRIE01047099.1:2251295-2251556
101
162
+
Bilateria
Bilateria
No
1
Hme-Mir-9-o3
hme-mir-79
MIR-9
UAAAGCU
None
MIMAT0024987
HE669612
9693
9752
-
H. melpomene
Bilateria
No
Hme-Mir-9-o4
None
MIR-9
UAAAGCU
None
None
HE671859
114241
114299
-
H. melpomene
Bilateria
No
1
Cbr-Mir-9-P15
cbr-mir-79
MIR-9
UAAAGCU
None
MIMAT0000486
I
1849428
1849490
+
Caenorhabditis
Bilateria
No
Npo-Mir-9
None
MIR-9
CUUUGGU
None
None
JACATO010000367.1
1247889
1247950
-
Bilateria
Bilateria
Unknown
1
Tca-Mir-9-o7
tca-mir-9b
MIR-9
UUUGGUA
MIMAT0019134
MIMAT0019135
KQ972687
113154
113211
-
T. castaneum
Bilateria
No
1
Bge-Mir-9-o11-v2
None
MIR-9
UUUGGUG
None
None
KZ614731.1
668641
668699
-
B. germanica
Bilateria
No
1
Pfl-Mir-9-v1
None
MIR-9
CUUUGGU
None
None
LD344854.1
129993
130052
+
Bilateria
Bilateria
No
1
1
Tca-Mir-3893
tca-mir-3893
MIR-3893
UAAAGCU
MIMAT0018888
MIMAT0018889
LG5
7457235
7457292
+
T. castaneum
T. castaneum
No
1
Tca-Mir-9-o9-v1
tca-mir-9d
MIR-9
UAAAGCU
MIMAT0018748
MIMAT0018749
LG5
7455728
7455787
+
T. castaneum
Bilateria
No
1
Xla-Mir-9-P2c
None
MIR-9
CUUUGGU
None
None
NC_030724.1
182078649
182078707
+
X. laevis
Bilateria
No
1
Xla-Mir-9-P4c
None
MIR-9
CUUUGGU
None
None
NC_030724.1
110894599
110894658
+
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P2d
None
MIR-9
CUUUGGU
None
None
NC_030725.1
151615023
151615081
+
X. laevis
Bilateria
No
1
Xla-Mir-9-P1c
None
MIR-9
CUUUGGU
None
None
NC_030728.1
99731313
99731374
+
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P1d
None
MIR-9
CUUUGGU
None
None
NC_030729.1
44001647
44001708
-
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P3c
None
MIR-9
CUUUGGU
None
None
NC_030738.1
109009154
109009215
+
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P3d
None
MIR-9
CUUUGGU
None
None
NC_030739.1
93000179
93000240
+
X. laevis
Bilateria
No
1
1
Sme-Mir-9-P30
sme-mir-79
MIR-9
UAAAGCU
MIMAT0012108
MIMAT0003988
NNSW01000017_dd_Smes_g4_17
1530998
1531058
-
S. mediterranea
Bilateria
No
1
Sko-Mir-9-v1
sko-mir-9
MIR-9
CUUUGGU
MIMAT0009610
MIMAT0009618
NW_003125887.1
164505
164564
-
Bilateria
Bilateria
No
1
1
Xla-Mir-9-P4d
None
MIR-9
CUUUGGU
None
None
NW_016694812.1
1485278
1485337
-
X. laevis
Bilateria
No
1
1
Bpl-Mir-9
None
MIR-9
UAAAGCU
None
None
QEOQ01000508.1
5682168
5682235
-
Bilateria
Bilateria
No
Spt-Mir-9-P4
None
MIR-9
CUUUGGU
None
None
QEPC01010893.1
4822954
4823013
-
Gnathostomata
Bilateria
Unknown
1
1
1
Spt-Mir-9-P1
None
MIR-9
CUUUGGU
None
None
QEPC01014402.1
10342911
10342972
-
Gnathostomata
Bilateria
Unknown
1
1
Spt-Mir-9-P2
None
MIR-9
CUUUGGU
None
None
QEPC01014630.1
2369426
2369485
+
Gnathostomata
Bilateria
Unknown
1
1
Spt-Mir-9-P3
None
MIR-9
CUUUGGU
None
None
QEPC01015423.1
5228264
5228325
+
Gnathostomata
Bilateria
Unknown
1
1
Ovu-Mir-9
None
MIR-9
CUUUGGU
None
None
RXHP01026531.1
105328
105389
-
Bilateria
Bilateria
No
1
Asu-Mir-9-o18
asu-mir-79
MIR-9
UAAAGCU
MIMAT0021472
MIMAT0021473
Scaffold46
2189447
2189505
-
A. suum
Bilateria
No
1
1
Dan-Mir-9-P12-v2
dan-mir-79
MIR-9
UAAAGCU
None
MIMAT0008430
scaffold_12916
15864734
15864795
-
Diptera
Bilateria
No
Dan-Mir-9-P9
dan-mir-4
MIR-9
UAAAGCU
None
MIMAT0008427
scaffold_13266
9731536
9731592
+
Drosophila
Bilateria
No
1
Dmo-Mir-9-P9
dmo-mir-4
MIR-9
UAAAGCU
None
MIMAT0008629
scaffold_6496
20936638
20936694
-
Drosophila
Bilateria
No
1
Dmo-Mir-9-P12-v2
dmo-mir-79
MIR-9
UAAAGCU
None
MIMAT0008690
scaffold_6500
7202147
7202208
+
Diptera
Bilateria
No
1
Aae-Mir-9-P12-v2
aae-mir-79
MIR-9
UAAAGCU
MIMAT0014294
MIMAT0014295
supercont1.785
213278
213337
+
Diptera
Bilateria
No
Cbr-Mir-9-P14
cbr-mir-75
MIR-9
UAAAGCU
None
MIMAT0000484
X
4419753
4419815
-
Caenorhabditis
Bilateria
No
Download sequences for:
precursor
|
5p
|
3p
|
mature
|
star
|
mature/star
|
loop
|
extend_pre
|
all