MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-9-P14

Family name MIR-9 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-75
Paralogues Cel-Mir-9-P15  Cel-Mir-9-P16 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cbr-Mir-9-P14  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrX: 2372475-2372534 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-9-P14)		 Mir-73-P1 chrX: 2368787-2368848 [+] UCSC Ensembl
Mir-73-P2 chrX: 2369062-2369124 [+] UCSC Ensembl
Mir-9-P14 chrX: 2372475-2372534 [+] UCSC Ensembl
Seed UAAAGCU
Precursor
(pre-Mir +30nt flank)		 
UUUCUACUUUCUUGUUGCUUUGAAGAAUUGCAGUCGGUUGCAAGCUUAAAUACAAAUCCGAAUUGUUAUUAAAGCUACCAACCGGCUUCAAGUCUGAAAGAGCAGUUGAAAAAAGGUAAG
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Structure
        10         20         30        40        50         
UUUCUACUUUCUUGUUG-    GA-|  A   C         CA     A    CAAAUC 
                  CUUU   AGA UUG AGUCGGUUG  AGCUU AAUA      C
                  GAGA   UCU AAC UCGGCCAAC  UCGAA UUAU      G
GAAUGGAAAAAAGUUGAC    AAG^  G   U         CA     A    UGUUAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-9-P14_5p*
mirBase accessionMIMAT0015108
Sequence 
0- CAGUCGGUUGCAAGCUUAAAUA -22
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Proposed targets microrna.org: MIMAT0015108
Mature sequence

Cel-Mir-9-P14_3p
mirBase accessionMIMAT0000047
Sequence 
38- UUAAAGCUACCAACCGGCUUCA -60
Get sequence
Proposed targets microrna.org: MIMAT0000047
TargetScanWorm: cel-miR-75