MirGeneDB 3.0

75 microRNA genes with node of origin C. gigas

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Mgi-Mir-2-o56	None	MIR-2	GGUCAAU	None	None	scaffold602	445001	445057	+	C. gigas	Protostomia		No		1
Mgi-Mir-2-o57	None	MIR-2	AUCACAG	None	None	scaffold602	445414	445474	+	C. gigas	Protostomia		No			1
Mgi-Mir-2-o58a	None	MIR-2	AUCACAG	None	None	scaffold1503	15162	15221	-	C. gigas	Protostomia		No	1
Mgi-Mir-2-o58b	None	MIR-2	AUCACAG	None	None	scaffold602	445724	445782	+	C. gigas	Protostomia		No			1
Mgi-Mir-2-o59	None	MIR-2	AUCACAG	None	None	scaffold602	445843	445901	+	C. gigas	Protostomia		No
Mgi-Mir-2-o60	None	MIR-2	AUCACAG	None	None	scaffold602	446019	446076	+	C. gigas	Protostomia		No			1
Mgi-Mir-2-o61	None	MIR-2	AUCACAG	None	None	scaffold602	446534	446592	+	C. gigas	Protostomia		No	1		1
Mgi-Mir-2-o62	None	MIR-2	AUCACAG	None	None	scaffold1503	13873	13931	-	C. gigas	Protostomia		No	1		1
Mgi-Mir-9-P17	None	MIR-9	CUUUGGU	None	None	scaffold42448	85409	85470	-	C. gigas	Bilateria		No			1
Mgi-Mir-9-P18	None	MIR-9	CUUUGGU	None	None	scaffold42448	84463	84524	-	C. gigas	Bilateria		No			1
Mgi-Mir-9-P19	None	MIR-9	CUUUGGU	None	None	scaffold42448	83582	83643	-	C. gigas	Bilateria		No			1
Mgi-Mir-67-P4	None	MIR-67	ACAACCU	None	None	scaffold146	102295	102351	+	C. gigas	Protostomia		No		1	1
Mgi-Mir-67-P5	None	MIR-67	CACAACC	None	None	scaffold146	102638	102698	+	C. gigas	Protostomia		No			1
Mgi-Mir-67-P6	None	MIR-67	CACAACC	None	None	scaffold226	224596	224654	-	C. gigas	Protostomia		No	1		1
Mgi-Mir-92-o32	None	MIR-92	AUUGCAC	None	None	C33654	9471	9530	+	C. gigas	Bilateria		No		1	1
Mgi-Mir-92-o33	None	MIR-92	AUUGCAC	None	None	scaffold459	320194	320253	-	C. gigas	Bilateria		No		1	1
Mgi-Mir-92-o34	None	MIR-92	AUUGCAC	None	None	scaffold459	311201	311262	-	C. gigas	Bilateria		No			1
Mgi-Mir-92-o35	None	MIR-92	AUUGCAC	None	None	scaffold459	310883	310941	-	C. gigas	Bilateria		No		1	1
Mgi-Mir-96-P2l	None	MIR-96	UUGGCAC	None	None	scaffold626	26567	26631	+	C. gigas	Bilateria		No			1
Mgi-Mir-96-P2m	None	MIR-96	UUGGCAC	None	None	scaffold42648	4758	4816	+	C. gigas	Bilateria		No			1
Mgi-Mir-184-P7	None	MIR-184	GGACGGA	None	None	scaffold1832	85298	85356	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P8a	None	MIR-184	GGACGGA	None	None	scaffold43150	62920	62976	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P8b	None	MIR-184	GGACGGA	None	None	scaffold121	721341	721398	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P8c	None	MIR-184	GGACGGA	None	None	scaffold121	721728	721785	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P8d	None	MIR-184	GGACGGA	None	None	scaffold43150	66305	66362	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P9	None	MIR-184	CUUGUCA	None	None	scaffold121	720703	720760	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P10	None	MIR-184	GGACGGA	None	None	scaffold43150	66053	66110	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P11	None	MIR-184	GGACGGA	None	None	scaffold121	721087	721144	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P12	None	MIR-184	CUUGUCA	None	None	scaffold121	718786	718842	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P13a	None	MIR-184	CUUGUCA	None	None	scaffold43150	67584	67641	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P13b	None	MIR-184	GGACGGA	None	None	scaffold43150	66456	66512	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P14	None	MIR-184	GGACGGA	None	None	scaffold43150	66584	66641	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a1	None	MIR-184	GGACGGA	None	None	scaffold121	718149	718206	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a2	None	MIR-184	GGACGGA	None	None	scaffold121	719424	719481	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a3	None	MIR-184	GGACGGA	None	None	scaffold121	720319	720376	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a4	None	MIR-184	GGACGGA	None	None	scaffold121	721600	721657	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a5	None	MIR-184	GGACGGA	None	None	scaffold121	721856	721913	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15a6	None	MIR-184	GGACGGA	None	None	scaffold121	722115	722172	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P15a7	None	MIR-184	GGACGGA	None	None	scaffold121	722371	722428	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15b	None	MIR-184	GGACGGA	None	None	scaffold121	721987	722044	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15c	None	MIR-184	GGACGGA	None	None	scaffold121	718530	718587	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15d	None	MIR-184	GGACGGA	None	None	scaffold121	718658	718715	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P15e1	None	MIR-184	GGACGGA	None	None	scaffold121	718275	718332	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15e2	None	MIR-184	GGACGGA	None	None	scaffold121	718401	718458	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15e3	None	MIR-184	GGACGGA	None	None	scaffold121	720447	720504	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15f	None	MIR-184	GGACGGA	None	None	scaffold121	719552	719609	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15g1	None	MIR-184	GGACGGA	None	None	scaffold121	719041	719098	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15g2	None	MIR-184	GGACGGA	None	None	scaffold121	719169	719226	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15g3	None	MIR-184	GGACGGA	None	None	scaffold121	719297	719354	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15h	None	MIR-184	GGACGGA	None	None	scaffold121	720192	720249	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15i	None	MIR-184	GGACGGA	None	None	scaffold121	721214	721271	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15j	None	MIR-184	GGACGGA	None	None	scaffold121	720064	720121	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15k	None	MIR-184	GGACGGA	None	None	scaffold121	721469	721526	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15l1	None	MIR-184	GGACGGA	None	None	scaffold121	719680	719737	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15l2	None	MIR-184	GGACGGA	None	None	scaffold121	720575	720632	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15m	None	MIR-184	GGACGGA	None	None	scaffold121	718913	718970	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P15n	None	MIR-184	GGACGGA	None	None	scaffold43150	63749	63806	-	C. gigas	Nephrozoa		No
Mgi-Mir-184-P15o	None	MIR-184	GGACGGA	None	None	scaffold43150	64048	64105	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15p	None	MIR-184	GGACGGA	None	None	scaffold43150	65310	65367	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15q	None	MIR-184	GGACGGA	None	None	scaffold43150	66926	66983	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15r	None	MIR-184	GGACGGA	None	None	scaffold43150	67056	67113	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15s	None	MIR-184	GGACGGA	None	None	scaffold43150	63192	63248	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15t	None	MIR-184	GGACGGA	None	None	scaffold43150	63471	63527	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-184-P15u	None	MIR-184	GGACGGA	None	None	scaffold43150	64385	64441	-	C. gigas	Nephrozoa		No			1
Mgi-Mir-317-P1	None	MIR-317	GAACACA	None	None	scaffold622	468076	468134	+	C. gigas	Protostomia		No			1
Mgi-Mir-317-P2	None	MIR-317	GAACACA	None	None	scaffold622	468583	468640	+	C. gigas	Protostomia		No			1
Mgi-Mir-375-P3	None	MIR-375	UUGUUCA	None	None	scaffold527	289953	290015	+	C. gigas	Nephrozoa		No		1	1
Mgi-Mir-375-P4	None	MIR-375	UUGUUCA	None	None	scaffold527	290181	290238	+	C. gigas	Nephrozoa		No			1
Mgi-Novel-1	None	MGI-NOVEL-1	GGCGAGC	None	None	scaffold960	301290	301359	+	C. gigas	C. gigas		Yes
Mgi-Novel-2	None	MGI-NOVEL-2	GAGCUCA	None	None	scaffold1094	247350	247410	+	C. gigas	C. gigas		Yes			1
Mgi-Novel-3	None	MGI-NOVEL-3	CAUACAA	None	None	scaffold1742	63371	63430	+	C. gigas	C. gigas		No
Mgi-Novel-4	None	MGI-NOVEL-4	GCACCAA	None	None	scaffold370	643284	643343	+	C. gigas	C. gigas		No			1
Mgi-Novel-5	None	MGI-NOVEL-5	GCUAUAA	None	None	scaffold631	283594	283651	-	C. gigas	C. gigas		No
Mgi-Novel-6	None	MGI-NOVEL-6	GUGGUGC	None	None	scaffold43364	108910	108968	+	C. gigas	C. gigas		No	1		1
Mgi-Novel-7	None	MGI-NOVEL-7	GGUUAAG	None	None	scaffold705	16090	16154	+	C. gigas	C. gigas		No

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all