MirGeneDB 3.0
MirGeneDB ID

Mgi-Mir-184-P9

Family name MIR-184 (all species)
Species Pacific oyster (Magallana gigas)
MiRBase ID
Paralogues Mgi-Mir-184-P7  Mgi-Mir-184-P8a  Mgi-Mir-184-P8b  Mgi-Mir-184-P8c  Mgi-Mir-184-P8d  Mgi-Mir-184-P10  Mgi-Mir-184-P11  Mgi-Mir-184-P12  Mgi-Mir-184-P13a  Mgi-Mir-184-P13b  Mgi-Mir-184-P14  Mgi-Mir-184-P15a1  Mgi-Mir-184-P15a2  Mgi-Mir-184-P15a3  Mgi-Mir-184-P15a4  Mgi-Mir-184-P15a5  Mgi-Mir-184-P15a6  Mgi-Mir-184-P15a7  Mgi-Mir-184-P15b  Mgi-Mir-184-P15c  Mgi-Mir-184-P15d  Mgi-Mir-184-P15e1  Mgi-Mir-184-P15e2  Mgi-Mir-184-P15e3  Mgi-Mir-184-P15f  Mgi-Mir-184-P15g1  Mgi-Mir-184-P15g2  Mgi-Mir-184-P15g3  Mgi-Mir-184-P15h  Mgi-Mir-184-P15i  Mgi-Mir-184-P15j  Mgi-Mir-184-P15k  Mgi-Mir-184-P15l1  Mgi-Mir-184-P15l2  Mgi-Mir-184-P15m  Mgi-Mir-184-P15n  Mgi-Mir-184-P15o  Mgi-Mir-184-P15p  Mgi-Mir-184-P15q  Mgi-Mir-184-P15r  Mgi-Mir-184-P15s  Mgi-Mir-184-P15t  Mgi-Mir-184-P15u 
Orthologues Aae-Mir-184  Aca-Mir-184  Aga-Mir-184  Agr-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bko-Mir-184  Bla-Mir-184  Bpl-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cja-Mir-184  Cli-Mir-184  Cmi-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dgr-Mir-184  Dlo-Mir-184  Dma-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dsi-Mir-184  Dya-Mir-184  Eba-Mir-184  Eca-Mir-184  Egr-Mir-184  Esc-Mir-184  Ete-Mir-184  Gga-Mir-184  Gja-Mir-184  Gpa-Mir-184  Gsa-Mir-184  Gsp-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Laf-Mir-184  Lan-Mir-184  Lch-Mir-184  Lhy-Mir-184  Loc-Mir-184  Mdo-Mir-184  Mml-Mir-184  Mmr-Mir-184  Mmu-Mir-184  Mom-Mir-184  Neu-Mir-184  Npo-Mir-184  Oan-Mir-184  Ocu-Mir-184  Ofu-Mir-184  Pab-Mir-184  Pau-Mir-184  Pbv-Mir-184  Pdu-Mir-184  Pfl-Mir-184  Pma-Mir-184  Pmi-Mir-184  Pve-Mir-184  Rno-Mir-184  Rph-Mir-184  Sha-Mir-184  Sko-Mir-184  Sne-Mir-184  Snu-Mir-184  Spt-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Tur-Mir-184  War-Mir-184  Xtr-Mir-184 
Node of Origin (locus) C. gigas
Node of Origin (family) Nephrozoa
Genome context
(CGI_GCA_000297895.1)		 scaffold121: 720703-720760 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-184-P9)		 Mir-184-P15a1 scaffold121: 718149-718206 [-] Ensembl
Mir-184-P15e1 scaffold121: 718275-718332 [-] Ensembl
Mir-184-P15e2 scaffold121: 718401-718458 [-] Ensembl
Mir-184-P15c scaffold121: 718530-718587 [-] Ensembl
Mir-184-P15d scaffold121: 718658-718715 [-] Ensembl
Mir-184-P12 scaffold121: 718786-718842 [-] Ensembl
Mir-184-P15m scaffold121: 718913-718970 [-] Ensembl
Mir-184-P15g1 scaffold121: 719041-719098 [-] Ensembl
Mir-184-P15g2 scaffold121: 719169-719226 [-] Ensembl
Mir-184-P15g3 scaffold121: 719297-719354 [-] Ensembl
Mir-184-P15a2 scaffold121: 719424-719481 [-] Ensembl
Mir-184-P15f scaffold121: 719552-719609 [-] Ensembl
Mir-184-P15l1 scaffold121: 719680-719737 [-] Ensembl
Mir-184-P15j scaffold121: 720064-720121 [-] Ensembl
Mir-184-P15h scaffold121: 720192-720249 [-] Ensembl
Mir-184-P15a3 scaffold121: 720319-720376 [-] Ensembl
Mir-184-P15e3 scaffold121: 720447-720504 [-] Ensembl
Mir-184-P15l2 scaffold121: 720575-720632 [-] Ensembl
Mir-184-P9 scaffold121: 720703-720760 [-] Ensembl
Mir-184-P11 scaffold121: 721087-721144 [-] Ensembl
Mir-184-P15i scaffold121: 721214-721271 [-] Ensembl
Mir-184-P8b scaffold121: 721341-721398 [-] Ensembl
Mir-184-P15k scaffold121: 721469-721526 [-] Ensembl
Mir-184-P15a4 scaffold121: 721600-721657 [-] Ensembl
Mir-184-P8c scaffold121: 721728-721785 [-] Ensembl
Mir-184-P15a5 scaffold121: 721856-721913 [-] Ensembl
Mir-184-P15b scaffold121: 721987-722044 [-] Ensembl
Mir-184-P15a6 scaffold121: 722115-722172 [-] Ensembl
Mir-184-P15a7 scaffold121: 722371-722428 [-] Ensembl
Seed CUUGUCA
Precursor
(pre-Mir +30nt flank)		 
CACAGAUAACAAAUACAACGUGUUGCGUUUCCUUGUCACACAUUCGUCACAGUGACAUUCAAACACUGGACGGAAUUCUGAUAAGGGAUCGCACAGGGAACUUCUUCAUGAUGUCAAU
Get precursor sequence
Structure
        10        20           30        40        50         
CACAGAUAACAAAUACAACG---|  U   U          CACA      A    GACAU 
                       UGU GCG UUCCUUGUCA    UUCGUC CAGU     \
                       ACA CGC AGGGAAUAGU    AGGCAG GUCA     U
UAACUGUAGUACUUCUUCAAGGG^  -   U          CUUA      -    CAAAC 
      110       100         90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
A- D- D- F- L- Ea Eg Fe Gi Ha He Ju La Ma Ma Ma Pe Re Sp Um
Mature sequence

Mgi-Mir-184-P9_5p
mirBase accessionNone
Sequence 
0- CCUUGUCACACAUUCGUCACAGU -23
Get sequence
Co-mature sequence

Mgi-Mir-184-P9_3p
mirBase accessionNone
Sequence 
36- UGGACGGAAUUCUGAUAAGGGA -58
Get sequence