MirGeneDB 3.0

20 microRNA genes with node of origin A. carolinensis
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Aca-Mir-1677-o1 aca-mir-1677a MIR-1677 GACUUCA None MIMAT0021796 5 15152952 15153008 + A. carolinensis Diapsida Unknown
Aca-Mir-5396-P1 aca-mir-5396a MIR-5396 CGCACAA MIMAT0022003 None 1 69318558 69318617 + A. carolinensis A. carolinensis No 1
Aca-Mir-5396-P2 aca-mir-5396b MIR-5396 CACACAA MIMAT0037580 MIMAT0037581 1 213792664 213792723 - A. carolinensis A. carolinensis No 1
Aca-Mir-5397 aca-mir-5397 MIR-5397 ACGCAGA MIMAT0022004 MIMAT0022005 2 92804660 92804720 + A. carolinensis A. carolinensis No 1
Aca-Mir-5399 aca-mir-5399 MIR-5399 UGCAAGA MIMAT0022008 MIMAT0022009 3 25386690 25386749 - A. carolinensis A. carolinensis No 1
Aca-Mir-5402 aca-mir-5402 MIR-5402 CUUCUCU MIMAT0022012 MIMAT0022013 GL343894.1 87890 87947 + A. carolinensis A. carolinensis No
Aca-Mir-5405 aca-mir-5405 MIR-5405 GUUUUAU MIMAT0022018 MIMAT0022019 GL343207.1 3269097 3269153 + A. carolinensis A. carolinensis No 1
Aca-Mir-5406 aca-mir-5406 MIR-5406 UUUAGAC MIMAT0022020 MIMAT0022021 GL343282.1 1474914 1474970 - A. carolinensis A. carolinensis No 1
Aca-Mir-5407 aca-mir-5407 MIR-5407 UUCGGAU MIMAT0022022 MIMAT0022023 GL343282.1 1475314 1475373 - A. carolinensis A. carolinensis No 1
Aca-Mir-5408 aca-mir-5408a MIR-5408 UAUCUCC MIMAT0022024 MIMAT0022025 GL343282.1 1472528 1472585 - A. carolinensis A. carolinensis No 1
Aca-Mir-5412 aca-mir-5412 MIR-5412 AGGGUCC MIMAT0022030 MIMAT0022031 GL343214.1 285133 285189 - A. carolinensis A. carolinensis No 1
Aca-Mir-5417 aca-mir-5417 MIR-5417 CAUCCCA None MIMAT0022037 GL343364.1 1077044 1077099 - A. carolinensis A. carolinensis No 1
Aca-Mir-5426 aca-mir-5426 MIR-5426 ACUCUAA MIMAT0022046 MIMAT0022047 3 195203204 195203265 + A. carolinensis A. carolinensis No 1
Aca-Mir-5435 aca-mir-5435b MIR-5435 AUGACCU MIMAT0022090 MIMAT0022090 2 25825607 25825663 + A. carolinensis A. carolinensis No
Aca-Mir-5436 aca-mir-5436 MIR-5436 GCUCGCU MIMAT0022057 MIMAT0022058 4 151844946 151845004 + A. carolinensis A. carolinensis No 1
Aca-Mir-5452 aca-mir-5452 MIR-5452 GGCCCUC MIMAT0022075 MIMAT0022076 GL343282.1 1468406 1468464 + A. carolinensis A. carolinensis No
Aca-Mir-9572 aca-mir-9572 MIR-9572 ACAGCCU MIMAT0037576 MIMAT0037577 GL343262.1 1379996 1380056 - A. carolinensis A. carolinensis No 1 1
Aca-Mir-9573 aca-mir-9573 MIR-9573 CAAAACU MIMAT0037578 MIMAT0037579 3 176359718 176359772 - A. carolinensis A. carolinensis No 1 1
Aca-Mir-9574 aca-mir-9574 MIR-9574 UUCAUCU MIMAT0037582 MIMAT0037583 2 141270233 141270287 + A. carolinensis A. carolinensis No
Aca-Mir-9576 aca-mir-9576 MIR-9576 UUUUAUA MIMAT0037586 MIMAT0037587 GL343418.1 621266 621323 - A. carolinensis A. carolinensis No 1

(red - mature/co-mature, blue - star)

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