| MirGeneDB ID | Aca-Mir-9572 |
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| Family name |
MIR-9572 (all species) |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-9572
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. carolinensis
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| Node of Origin (family) |
A. carolinensis
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Genome context
(anoCar2) |
GL343262.1: 1379996-1380056 [-]
UCSC
Ensembl
|
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| Seed |
ACAGCCU |
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Precursor
(pre-Mir +30nt flank) |
UAAUCUCAACAAUAAAUGUCUCUGGGUUACUGUGGGUUUUCCAGUCUGUAUGGCCAUGUUCCAGAAGCAUACAGCCUGGAAAACUUGCAGCAACCCAGUGGUUCCGGCCACGAAAGCCUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAAUCUCAACAAUAAAUG--| U A UG U GCCAUGU
UC CUGGGUU CUG GGUUUUCCAG CUGUAUG \
GG GACCCAA GAC UCAAAAGGUC GACAUAC U
UUUCCGAAAGCACCGGCCUU^ U C GU C GAAGACC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Aca-Mir-9572_5p* |
| mirBase accession | MIMAT0037576 |
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| Sequence |
0- UGUGGGUUUUCCAGUCUGUAUG -22
Get sequence
|
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| Mature sequence |
Aca-Mir-9572_3p |
| mirBase accession | MIMAT0037577 |
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| Sequence |
39- UACAGCCUGGAAAACUUGCAGC -61
Get sequence
|
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