MirGeneDB 3.0
52 microRNA genes with seed UAAAGCU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Tca-Mir-3893 tca-mir-3893 MIR-3893 UAAAGCU MIMAT0018888 MIMAT0018889 LG5 7457235 7457292 + T. castaneum T. castaneum No 1
Pcr-Mir-9-P38 None MIR-9 CUUUGGU None None CAJQUW010001534.1 327276 327338 + P. crozeri Bilateria No 1
Ava-Mir-9-P34 None MIR-9 CUUUGGU None None CP075496.1 13241633 13241695 + A. vaga Bilateria No
Ava-Mir-9-P33 None MIR-9 CUUUGGU None None CP075493.1 1601314 1601376 - A. vaga Bilateria No
Sme-Mir-9-P30 sme-mir-79 MIR-9 UAAAGCU MIMAT0012108 MIMAT0003988 NNSW01000017_dd_Smes_g4_17 1530998 1531058 - S. mediterranea Bilateria No 1
Cel-Mir-9-P15 cel-mir-79 MIR-9 UAAAGCU MIMAT0020322 MIMAT0000051 chrI 9332964 9333027 + Caenorhabditis Bilateria No
Cbr-Mir-9-P15 cbr-mir-79 MIR-9 UAAAGCU None MIMAT0000486 I 1849428 1849490 + Caenorhabditis Bilateria No
Cel-Mir-9-P14 cel-mir-75 MIR-9 UAAAGCU MIMAT0015108 MIMAT0000047 chrX 2372475 2372534 + Caenorhabditis Bilateria No
Cbr-Mir-9-P14 cbr-mir-75 MIR-9 UAAAGCU None MIMAT0000484 X 4419753 4419815 - Caenorhabditis Bilateria No
Tca-Mir-9-P12 tca-mir-9b MIR-9 UUUGGUA MIMAT0019134 MIMAT0019135 KQ972687 113154 113211 - Neoptera Bilateria No 1
Hme-Mir-9-P12 hme-mir-79 MIR-9 UAAAGCU None MIMAT0024987 HE669612 9693 9752 - Neoptera Bilateria No
Tca-Mir-9-P9b V tca-mir-9d MIR-9 UAAAGCU MIMAT0018748 MIMAT0018749 LG5 7455728 7455787 + T. castaneum Bilateria 2 No 1
Hme-Mir-9-P9 None MIR-9 UAAAGCU None None HE671859 114241 114299 - Pancrustacea Bilateria No 1
Dya-Mir-9-P9 dya-mir-4 MIR-9 UAAAGCU None MIMAT0009058 2R 13623927 13623983 + Pancrustacea Bilateria No 1
Dsi-Mir-9-P9 dsi-mir-4 MIR-9 UAAAGCU None MIMAT0008842 2R 16151148 16151204 - Pancrustacea Bilateria No 1
Dmo-Mir-9-P9 dmo-mir-4 MIR-9 UAAAGCU None MIMAT0008629 scaffold_6496 20936638 20936694 - Pancrustacea Bilateria No 1
Dme-Mir-9-P9 dme-mir-4 MIR-9 UAAAGCU MIMAT0020785 MIMAT0000109 2R 19661300 19661356 - Pancrustacea Bilateria No 1
Dan-Mir-9-P9 dan-mir-4 MIR-9 UAAAGCU None MIMAT0008427 scaffold_13266 9731536 9731592 + Pancrustacea Bilateria No 1
Xla-Mir-9-P4d None MIR-9 CUUUGGU None None NW_016694812.1 1485278 1485337 - X. laevis Bilateria No 1 1
Xla-Mir-9-P4c None MIR-9 CUUUGGU None None NC_030724.1 110894599 110894658 + X. laevis Bilateria No 1 1
Spt-Mir-9-P4 None MIR-9 CUUUGGU None None QEPC01010893.1 4822954 4823013 - Gnathostomata Bilateria Unknown 1 1 1
Xla-Mir-9-P3d None MIR-9 CUUUGGU None None NC_030739.1 93000179 93000240 + X. laevis Bilateria No 1 1
Xla-Mir-9-P3c None MIR-9 CUUUGGU None None NC_030738.1 109009154 109009215 + X. laevis Bilateria No 1 1
Spt-Mir-9-P3 None MIR-9 CUUUGGU None None QEPC01015423.1 5228264 5228325 + Gnathostomata Bilateria Unknown 1 1
Pab-Mir-9-P3 None MIR-9 CUUUGGU None None CM054679.2 94170821 94170882 + Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P3 mmu-mir-9-1 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr3 88215613 88215674 + Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P3 hsa-mir-9-1 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr1 156420353 156420414 - Gnathostomata Bilateria No 1 1
Xla-Mir-9-P2d None MIR-9 CUUUGGU None None NC_030725.1 151615023 151615081 + X. laevis Bilateria No 1
Xla-Mir-9-P2c None MIR-9 CUUUGGU None None NC_030724.1 182078649 182078707 + X. laevis Bilateria No 1
Spt-Mir-9-P2 None MIR-9 CUUUGGU None None QEPC01014630.1 2369426 2369485 + Gnathostomata Bilateria Unknown 1 1
Pab-Mir-9-P2 None MIR-9 CUUUGGU None None CM054683.2 96410410 96410469 - Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P2 mmu-mir-9-2 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr13 83738821 83738880 + Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P2 hsa-mir-9-2 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr5 88666865 88666924 - Gnathostomata Bilateria No 1 1
Xla-Mir-9-P1d None MIR-9 CUUUGGU None None NC_030729.1 44001647 44001708 - X. laevis Bilateria No 1 1
Xla-Mir-9-P1c None MIR-9 CUUUGGU None None NC_030728.1 99731313 99731374 + X. laevis Bilateria No 1 1
Spt-Mir-9-P1 None MIR-9 CUUUGGU None None QEPC01014402.1 10342911 10342972 - Gnathostomata Bilateria Unknown 1 1
Pab-Mir-9-P1 None MIR-9 CUUUGGU None None CM054695.2 92449932 92449993 + Gnathostomata Bilateria No 1 1
Mmu-Mir-9-P1 mmu-mir-9-3 MIR-9 CUUUGGU MIMAT0000142 MIMAT0000143 chr7 79505279 79505340 + Gnathostomata Bilateria No 1 1
Hsa-Mir-9-P1 hsa-mir-9-3 MIR-9 CUUUGGU MIMAT0000441 MIMAT0000442 chr15 89368032 89368093 + Gnathostomata Bilateria No 1 1
Asu-Mir-9-o18 asu-mir-79 MIR-9 UAAAGCU MIMAT0021472 MIMAT0021473 Scaffold46 2189447 2189505 - A.suum Bilateria No 1 1
Sko-Mir-9 V sko-mir-9 MIR-9 CUUUGGU MIMAT0009610 MIMAT0009618 NW_003125887.1 164505 164564 - Bilateria Bilateria 2 No 1 1
Pfl-Mir-9 V None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria 2 No 1 1
War-Mir-9 None MIR-9 CUUUGGU None None WNLI01165372.1 1191 1252 + Bilateria Bilateria No 1
Sma-Mir-9 None MIR-9 CUUUGGU None None HE601627.3 25734003 25734099 + Bilateria Bilateria Unknown 1
Pau-Mir-9 None MIR-9 CUUUGGU None None NMRA01000160.1 282399 282458 - Bilateria Bilateria No 1
Ovu-Mir-9 None MIR-9 CUUUGGU None None RXHP01026531.1 105328 105389 - Bilateria Bilateria No 1
Npo-Mir-9 None MIR-9 CUUUGGU None None JACATO010000367.1 1247889 1247950 - Bilateria Bilateria Unknown 1
Llo-Mir-9 None MIR-9 CUUUGGU None None OU342993.1 6082207 6082268 + Bilateria Bilateria No 1
Esc-Mir-9 None MIR-9 CUUUGGU None None CM044491.1 123669224 123669285 + Bilateria Bilateria No 1
Eba-Mir-9 None MIR-9 CUUUGGU None None WURV02196146.1 2621 2682 + Bilateria Bilateria No 1 1
Bpl-Mir-9 None MIR-9 UAAAGCU None None QEOQ01000508.1 5682168 5682235 - Bilateria Bilateria No
Bko-Mir-9 None MIR-9 UAAAGCU None None PJRA01000508.1 1072751 1072818 - Bilateria Bilateria No

(red - mature/co-mature, blue - star)

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