MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-3851-P9a

Family name MIR-3851 (all species)
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-3851n-1
Paralogues Tca-Mir-3851-P1  Tca-Mir-3851-P2  Tca-Mir-3851-P3  Tca-Mir-3851-P4a  Tca-Mir-3851-P4b  Tca-Mir-3851-P4c  Tca-Mir-3851-P4d  Tca-Mir-3851-P5a  Tca-Mir-3851-P5b  Tca-Mir-3851-P6  Tca-Mir-3851-P7  Tca-Mir-3851-P8a  Tca-Mir-3851-P8b  Tca-Mir-3851-P9b 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG2: 370015-370074 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-3851-P9a)		 Mir-11617-P1 LG2: 342479-342539 [-] Ensembl
Mir-3-P9a LG2: 342886-342945 [-] Ensembl
Mir-11617-P2 LG2: 364058-364118 [-] Ensembl
Mir-3-P7-v1 LG2: 364450-364510 [-] Ensembl
Mir-3-P7-v2 LG2: 364450-364510 [-] Ensembl
Mir-3851-P9a LG2: 370015-370074 [-] Ensembl
Mir-3851-P4b LG2: 371022-371081 [+] Ensembl
Mir-11617-P3 LG2: 372276-372333 [+] Ensembl
Mir-11619-P3 LG2: 374318-374376 [+] Ensembl
Seed AGUACGA
Precursor
(pre-Mir +30nt flank)		 
UUUUAUUAUUUUUGAGUAAAUUUAGUACUGGGUUGGCACAGAGUAGUACUGUGUAAAAUUCUAUUUCAUAGUACGACCCAUGCCGGCCUAGUAAGAAAUUUCAAUUCACCAGCAAGUCAU
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Structure
        10          20        30        40        50          
UUUUAUUAUUUUUGAGU--|     AG             CAGA  A        UAAAAU 
                   AAAUUU  UACUGGGUUGGCA    GU GUACUGUG      \
                   UUUAAA  AUGAUCCGGCCGU    CA CAUGAUAC      U
UACUGAACGACCACUUAAC^     GA             ACC-  G        UUUAUC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-3851-P9a_5p*
mirBase accessionMIMAT0045482
Sequence 
0- GGUUGGCACAGAGUAGUACUGUG -23
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Mature sequence

Tca-Mir-3851-P9a_3p
mirBase accessionMIMAT0045483
Sequence 
38- UAGUACGACCCAUGCCGGCCUA -60
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