MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-3851-P4b

Family name MIR-3851 (all species)
Seed AGUACGA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-3851k-2
Paralogues Tca-Mir-3851-P1  Tca-Mir-3851-P2  Tca-Mir-3851-P3  Tca-Mir-3851-P4a  Tca-Mir-3851-P4c  Tca-Mir-3851-P4d  Tca-Mir-3851-P5a  Tca-Mir-3851-P5b  Tca-Mir-3851-P6  Tca-Mir-3851-P7  Tca-Mir-3851-P8a  Tca-Mir-3851-P8b  Tca-Mir-3851-P9a  Tca-Mir-3851-P9b 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG2: 371022-371081 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-3851-P4b)		 Mir-11617-P1 LG2: 342479-342539 [-] Ensembl
Mir-11617-P2 LG2: 364058-364118 [-] Ensembl
Mir-3851-P9a LG2: 370015-370074 [-] Ensembl
Mir-3851-P4b LG2: 371022-371081 [+] Ensembl
Mir-11617-P3 LG2: 372276-372333 [+] Ensembl
Mir-11619-P3 LG2: 374318-374376 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAGUGAAAUUUGCAUAAAUUUAGUGCUGGGUUGGCAAAAGGUGGUACCAUGUAACAUUUUAACCCAUAGUACGACCCAUGCCGGCUCAGUAAUAAAUUAUAAUUCGCCAGCAAGUGAA
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Structure
        10          20        30        40        50          
UUAAGUGAAAUUUGCAUA--|     G             AAA   G    C   UAACAU 
                    AAUUUA UGCUGGGUUGGCA   GGU GUAC AUG      \
                    UUAAAU AUGACUCGGCCGU   CCA CAUG UAC      U
AAGUGAACGACCGCUUAAUA^     A             AC-   G    A   CCAAUU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-3851-P4b_5p*
mirBase accessionMIMAT0045493
Sequence 
0- GGUUGGCAAAAGGUGGUACCAUG -23
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Mature sequence

Tca-Mir-3851-P4b_3p
mirBase accessionMIMAT0045494
Sequence 
38- UAGUACGACCCAUGCCGGCUCA -60
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