Mir-3851-P7

MirGeneDB ID

Tca-Mir-3851-P7

Family name

MIR-3851 (all species)

Species

Red flour beetle (Tribolium castaneum)

MiRBase ID

tca-mir-3851m-4

Paralogues

Tca-Mir-3851-P1 Tca-Mir-3851-P2 Tca-Mir-3851-P3 Tca-Mir-3851-P4a Tca-Mir-3851-P4b Tca-Mir-3851-P4c Tca-Mir-3851-P4d Tca-Mir-3851-P5a Tca-Mir-3851-P5b Tca-Mir-3851-P6 Tca-Mir-3851-P8a Tca-Mir-3851-P8b Tca-Mir-3851-P9a Tca-Mir-3851-P9b

Orthologues

Node of Origin (locus)

T. castaneum

Node of Origin (family)

T. castaneum

Genome context
(Tcas5.2)

KQ971812: 13140-13199 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-3851-P7)

Mir-3-P9b KQ971812: 4156-4215 [-] Ensembl
Mir-11618-P2 KQ971812: 4386-4443 [-] Ensembl
Mir-3851-P5b KQ971812: 8277-8336 [-] Ensembl
Mir-3851-P7 KQ971812: 13140-13199 [-] Ensembl

Seed

GUUGGCA

Precursor
(pre-Mir +30nt flank)

GUUUUUAUUUUUUUAAUAAAUUUAGUACUGGGUUGGCACAGAGUAGUACUAUGUAAAAUUCUAUUUCAUAGUACGACCCGUGUCGGCCCAGUAAGAGACUUCAAUUUACCAGCAUGUCAU

Get precursor sequence

Structure

        10        20          30        40        50          
GUUUUUAUUUUUUUAAUAAA--|  AG              AGA  A        UAAAAU 
                      UUU  UACUGGGUUGGCAC   GU GUACUAUG      \
                      AGA  AUGACCCGGCUGUG   CA CAUGAUAC      U
UACUGUACGACCAUUUAACUUC^  GA              CC-  G        UUUAUC 
.       110       100        90        80         70