MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-3851-P6

Family name MIR-3851 (all species)
Seed AGUACGA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-3851l-3
Paralogues Tca-Mir-3851-P1  Tca-Mir-3851-P2  Tca-Mir-3851-P3  Tca-Mir-3851-P4a  Tca-Mir-3851-P4b  Tca-Mir-3851-P4c  Tca-Mir-3851-P4d  Tca-Mir-3851-P5a  Tca-Mir-3851-P5b  Tca-Mir-3851-P7  Tca-Mir-3851-P8a  Tca-Mir-3851-P8b  Tca-Mir-3851-P9a  Tca-Mir-3851-P9b 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 KQ972048: 1592-1650 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-3851-P6)		 Mir-3851-P6 KQ972048: 1592-1650 [-] Ensembl
Mir-3851-P9b KQ972048: 10408-10467 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAGCUAAAUUUUAGUGAAUUUAUUGCUGUGUUGGCAUAAGUAGUACCAUGAAAAAUUUGAAUCUAUAGUACGACCCAUGCCGACUCAGUAAUAAAUUACAAUUCCAGCAAGUGGAGA
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Structure
        10          20        30        40        50         
UUAAGCUAAAUUUUAGUG--|           U        AA  A    C   AAAAAU 
                    AAUUUAUUGCUG GUUGGCAU  GU GUAC AUG      \
                    UUAAAUAAUGAC CAGCCGUA  CA CAUG UAU      U
AGAGGUGAACGACCUUAACA^           U        CC  G    A   CUAAGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-3851-P6_5p*
mirBase accessionMIMAT0045554
Sequence 
0- UGUUGGCAUAAGUAGUACCAUG -22
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Mature sequence

Tca-Mir-3851-P6_3p
mirBase accessionMIMAT0045477
Sequence 
37- UAGUACGACCCAUGCCGACUCA -59
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