MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-3851-P2

Family name MIR-3851 (all species)
Seed AGUACGG
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-3851i
Paralogues Tca-Mir-3851-P1  Tca-Mir-3851-P3  Tca-Mir-3851-P4a  Tca-Mir-3851-P4b  Tca-Mir-3851-P4c  Tca-Mir-3851-P4d  Tca-Mir-3851-P5a  Tca-Mir-3851-P5b  Tca-Mir-3851-P6  Tca-Mir-3851-P7  Tca-Mir-3851-P8a  Tca-Mir-3851-P8b  Tca-Mir-3851-P9a  Tca-Mir-3851-P9b 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG6: 272921-272978 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-3851-P2)		 Mir-3851-P2 LG6: 272921-272978 [-] Ensembl
Mir-3851-P3 LG6: 273025-273083 [-] Ensembl
Mir-11626 LG6: 273389-273446 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGAUAAUUAAAUUCAUUGAAUUUAACAUUGAGUGGAUAUGGGGUGGUACUGUGAAUUUUUUGAACAUAGUACGGCCCAUGUCGGCUCACUGAUAAAUUCCAUUUCAACAAUAACACAG
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Structure
        10          20        30        40        50         
CGAUAAUUAAAUUCAUU--|      A  U     G        G G        AAUUU 
                   GAAUUUA CA UGAGU GAUAUGGG U GUACUGUG     \
                   CUUAAAU GU ACUCG CUGUACCC G CAUGAUAC     U
GACACAAUAACAACUUUAC^      A  C     G        - G        AAGUU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-3851-P2_5p*
mirBase accessionMIMAT0045534
Sequence 
0- AGUGGAUAUGGGGUGGUACUGUG -23
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Mature sequence

Tca-Mir-3851-P2_3p
mirBase accessionMIMAT0045535
Sequence 
36- UAGUACGGCCCAUGUCGGCUCA -58
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