Mir-3851-P3

MirGeneDB ID

Tca-Mir-3851-P3

Family name

MIR-3851 (all species)

Seed

AGUACGU

Species

Red flour beetle (Tribolium castaneum)

MiRBase ID

tca-mir-3851j

Paralogues

Tca-Mir-3851-P1 Tca-Mir-3851-P2 Tca-Mir-3851-P4a Tca-Mir-3851-P4b Tca-Mir-3851-P4c Tca-Mir-3851-P4d Tca-Mir-3851-P5a Tca-Mir-3851-P5b Tca-Mir-3851-P6 Tca-Mir-3851-P7 Tca-Mir-3851-P8a Tca-Mir-3851-P8b Tca-Mir-3851-P9a Tca-Mir-3851-P9b

Orthologues

Node of Origin (locus)

T. castaneum

Node of Origin (family)

T. castaneum

Genome context
(Tcas5.2)

LG6: 273025-273083 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-3851-P3)

Mir-3851-P2 LG6: 272921-272978 [-] Ensembl
Mir-3851-P3 LG6: 273025-273083 [-] Ensembl
Mir-11626 LG6: 273389-273446 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

GCUACCGGAUAAAUAAUAAAUAUGGUGAUGAGUUGAUUUGGGGUGGUACUAUGUUUGAAGAUACGCAUAGUACGUUCCGAAUCAACUUGUUAACAAAUUUAAAUUCGAUAAUUAAAUUC

Get precursor sequence

Structure

        10          20        30        40        50         
GCUACCGGAUAAAUAAU--|   A  G   UG           GG  G       UUUGA 
                   AAAU UG UGA  AGUUGAUUUGG  UG UACUAUG     A
                   UUUA AC AUU  UCAACUAAGCC  GC AUGAUAC     G
CUUAAAUUAAUAGCUUAAA^   A  A   GU           UU  -       GCAUA 
       110       100        90        80         70        60