MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-11618-P2

Family name MIR-11618 (all species)
Seed AUACCGA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-11618a-2
Paralogues Tca-Mir-11618-P1  Tca-Mir-11618-P3a  Tca-Mir-11618-P3b  Tca-Mir-11618-P4  Tca-Mir-11618-P5  Tca-Mir-11618-P6  Tca-Mir-11618-P7  Tca-Mir-11618-P8 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 KQ971812: 4386-4443 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-11618-P2)		 Mir-11618-P2 KQ971812: 4386-4443 [-] Ensembl
Mir-3851-P5b KQ971812: 8277-8336 [-] Ensembl
Mir-3851-P7 KQ971812: 13140-13199 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUUUUUACAAAAUGUUUUCGAUGUAUAGUUAGCAUUGGUCGUUUCUAUGCUUUUUAUGAUCAUAUACCGAUCGAUGCUCGCUUUAUUUCGAAUCACAUAACUGGAACGAAUAAA
Get precursor sequence
Structure
        10         20         30        40        50         
UUUUUUUUUUACAAAAU-  U-|    U   U   U           UUUC    CUUUU 
                  GU  UUCGA GUA AGU AGCAUUGGUCG    UAUG     \
                  CA  AAGCU UAU UCG UCGUAGCUAGC    AUAC     U
AAAUAAGCAAGGUCAAUA  CU^    U   U   C           CAU-    UAGUA 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-11618-P2_5p*
mirBase accessionMIMAT0045489
Sequence 
0- AGUUAGCAUUGGUCGUUUCUAUG -23
Get sequence
Mature sequence

Tca-Mir-11618-P2_3p
mirBase accessionMIMAT0045490
Sequence 
36- UAUACCGAUCGAUGCUCGCUUU -58
Get sequence