MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-459

Family name MIR-459 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-802
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041744.1: 21488371-21488431 [+]
Seed CAGUAAC
Precursor
(pre-Mir +30nt flank)
UGCUCCUCUCCGCGUUUCUGUUUCUUGCAGUCAGUAACAAAGAUUCAUCCUUGUGUCCUGUAAGCAACAGGGAGGGUCUUUGUCACUGAGUGCAAUUAAUGGUGGCCGACAGACCAGGAAG
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Structure
        10          20        30        40        50        60
UGCUCCUCUCCGCGUUU--|    UC     G     A          A       GUCCU 
                   CUGUU  UUGCA UCAGU ACAAAGAUUC UCCUUGU     G
                   GGUAA  AACGU AGUCA UGUUUCUGGG AGGGACA     U
GAAGGACCAGACAGCCGGU^    UU     G     C          -       ACGAA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-459_5p

mirBase accessionMIMAT0007181
Sequence
0- UCAGUAACAAAGAUUCAUCCUUGU -24
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Co-mature sequence

Oan-Mir-459_3p

mirBase accessionMIMAT0007182
Sequence
38- AGGGAGGGUCUUUGUCACUGAGU -61
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