MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-459

Family name MIR-459 (all species)
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-459
Paralogues
Orthologues Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017713645.1: 50777071-50777131 [+] UCSC
Seed CAGUAAC
Precursor
(pre-Mir +30nt flank)		 
AAUACAAUGGCAUAUUGUUGUUUCUUGCAAUCAGUAACAAGGAUUCAUCUCUGUAUUGUGUGAAGAACAGAGAGAGUCUUUGUAACUAAGUGCAAGUAAUAGCCAUUCAACGCGGGACCCA
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Structure
        10          20        30        40        50        60
AAUACAAUGGCAUAUUG--|    U      AUC   A          A       AUUGU 
                   UUGUU CUUGCA   AGU ACAAGGAUUC UCUCUGU     G
                   GAUAA GAACGU   UCA UGUUUCUGAG AGAGACA     U
ACCCAGGGCGCAACUUACC^    U      GAA   A          -       AGAAG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ami-Mir-459_5p
mirBase accessionMIMAT0038291
Sequence 
0- UCAGUAACAAGGAUUCAUCUCUGU -24
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Star sequence

Ami-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
38- AGAGAGAGUCUUUGUAACUAAGU -61
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