MirGeneDB 2.1
MirGeneDB ID

Mun-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmu-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 459_LR594638.1:67879792-67879928: 37-101 [-]
Precursor
(pre-Mir +30nt flank)
CCAUGCUCUUCUCUUCUGUGUUGUCUGCUAUCAGUAACCAGAUAUCAUCCCUGCUGUGUAAACUCAAUGGUCAGGAAUGGUUCUUGUUACUUACUGCAUACAUCAGCUAAGUCUUCAGGAGAGCA
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Structure
        10         20         30        40        50        60  
CCAUGCUCUUCUCUUCU-  GU-|  C   UAUC      C   U     C    CUGUGUAA 
                  GU   UGU UGC    AGUAAC AGA AUCAU CCUG        A
                  CG   ACA ACG    UCAUUG UCU UGGUA GGAC        C
ACGAGAGGACUUCUGAAU  ACU^  U   UCAU      U   -     A    UGGUAACU 
   120       110       100        90         80        70
Deep sequencing
CommentThere is a one nt substitution at position 13 in the mature sequence between the source of the reads (Typhlonectes compressicauda) and the source of genomic sequence (Microcaecilia unicolor).
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-459_5p
mirBase accessionNone
Sequence 
0- UCAGUAACCAGAUAUCAUCCCUG -23
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Star sequence

Mun-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
43- GGAAUGGUUCUUGUUACUUACU -65
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