MirGeneDB ID | Bta-Mir-459 |
Family name |
MIR-459 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
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Paralogues |
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Orthologues |
Ami-Mir-459
Cfa-Mir-459
Cja-Mir-459
Cli-Mir-459
Cpi-Mir-459
Cpo-Mir-459
Dno-Mir-459
Dre-Mir-459
Ebu-Mir-459
Eca-Mir-459
Ete-Mir-459
Gmo-Mir-459
Hsa-Mir-459
Laf-Mir-459
Loc-Mir-459
Mal-Mir-459
Mml-Mir-459
Mmr-Mir-459
Mmu-Mir-459
Mun-Mir-459
Oan-Mir-459
Ocu-Mir-459
Pab-Mir-459
Pma-Mir-459
Rno-Mir-459
Spt-Mir-459
Sto-Mir-459
Tni-Mir-459
Xla-Mir-459-P1
Xla-Mir-459-P2
Xtr-Mir-459
|
Node of Origin (locus) |
Vertebrata
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Node of Origin (family) |
Vertebrata
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037328.1: 148014653-148014713 [+]
UCSC
Ensembl
|
Seed |
CAGUAAC |
Precursor (pre-Mir +30nt flank) |
UCUCCAUCACCACCAGACUAUUAUUUGCAAUCAGUAACAAAGAUUCAUCCUUGUGUCCAUCAAGCAACAAGGAGAAUCUUUGUCACUAAGUGUAAAUAAUAGCUACACUUCACAUUAGAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UCUCCAUCACCACCAGA--| AUC A A GUCCA
CUAUUAUUUGCA AGU ACAAAGAUUC UCCUUGU U
GAUAAUAAAUGU UCA UGUUUCUAAG AGGAACA C
GAAGAUUACACUUCACAUC^ GAA C - ACGAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-459_5p |
mirBase accession | None |
Sequence |
0- UCAGUAACAAAGAUUCAUCCUUGU -24
Get sequence
|
Star sequence |
Bta-Mir-459_3p* |
mirBase accession | None |
Sequence |
38- AAGGAGAAUCUUUGUCACUAAGU -61
Get sequence
|