MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-459

Family name MIR-459 (all species)
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG14: 27735894-27735956 [-] Ensembl
Seed CAGUAAC
Precursor
(pre-Mir +30nt flank)		 
GUUGGGGUCCAACACCAAGGCCUUCUGUUGUCAGUAACAAGGAUUCAUCCUGCUGUGACUAUGUGGUGUGGCAGGGAAUCUCUGUUACUGGGGGCAGGGUGCCACCUUGGACAUGGCCACUGC
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Structure
        10          20        30        40        50        60  
GUUGGGGUCCAACACCAA--|  C       G         AG     AU      GUGACUA 
                    GGC UUCUGUU UCAGUAACA  GAUUC  CCUGCU       \
                    CCG GGGACGG GGUCAUUGU  CUAAG  GGACGG       U
CGUCACCGGUACAGGUUCCA^  U       G         CU     --      UGUGGUG 
 120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-459_5p
mirBase accessionNone
Sequence 
0- UCAGUAACAAGGAUUCAUCCUGCU -24
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Star sequence

Loc-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
41- CAGGGAAUCUCUGUUACUGGGG -63
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