Mir-459

MirGeneDB ID

Gmo-Mir-459

Family name

MIR-459 (all species)

Species

Cod (Gadus morhua)

MiRBase ID

gmo-mir-459

Paralogues

Orthologues

Ami-Mir-459 Bta-Mir-459 Cfa-Mir-459 Cja-Mir-459 Cli-Mir-459 Cpi-Mir-459 Cpo-Mir-459 Dno-Mir-459 Dre-Mir-459 Ebu-Mir-459 Eca-Mir-459 Ete-Mir-459 Hsa-Mir-459 Laf-Mir-459 Loc-Mir-459 Mal-Mir-459 Mml-Mir-459 Mmr-Mir-459 Mmu-Mir-459 Mun-Mir-459 Oan-Mir-459 Ocu-Mir-459 Pab-Mir-459 Pma-Mir-459 Rno-Mir-459 Spt-Mir-459 Sto-Mir-459 Tni-Mir-459 Xla-Mir-459-P1 Xla-Mir-459-P2 Xtr-Mir-459

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(Gadus_morhua.gadMor1.dna.toplevel)

contig116338: 245-307 [-] UCSC Ensembl

Seed

CAGUAAC

Precursor
(pre-Mir +30nt flank)

UGGAGGCGGAGAGAUUCUGACCCGUCGCUAUCAGUAACAAGGAUUCAUCCUGUUGUCACCAUAGAAAGCAACAGGAAGUCACUGUUACUGGCCGUGAGGGUCAAGUGGUCACACAUGCGCCAC

Get precursor sequence

Structure

        10           20        30        40        50        60  
UGGAGGCGGAGAGAUUC---|     G    UA         AG    CA       GUCACCA 
                    UGACCC UCGC  UCAGUAACA  GAUU  UCCUGUU       \
                    ACUGGG AGUG  GGUCAUUGU  CUGA  AGGACAA       U
CACCGCGUACACACUGGUGA^     -    CC         CA    --       CGAAAGA 
 120       110       100         90        80          70