MirGeneDB 3.0

33 microRNA genes with seed CAGUAAC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Ami-Mir-459 ami-mir-459 MIR-459 CAGUAAC MIMAT0038291 None NW_017713645.1 50777071 50777131 + Vertebrata Vertebrata Unknown 1
Bta-Mir-459 None MIR-459 CAGUAAC None None NC_037328.1 148014653 148014713 + Vertebrata Vertebrata Unknown 1
Cfa-Mir-459 cfa-mir-802 MIR-459 CAGUAAC MIMAT0009928 None chr31 31005215 31005275 + Vertebrata Vertebrata No 1
Cja-Mir-459 None MIR-459 CAGUAAC None None CM021935.1 40019583 40019643 + Vertebrata Vertebrata Unknown 1
Cli-Mir-459 cli-mir-459 MIR-459 CAGUAAC MIMAT0038651 None scaffold101 3576180 3576240 - Vertebrata Vertebrata Unknown 1
Cpi-Mir-459 cpi-mir-459 MIR-459 CAGUAAC MIMAT0037892 MIMAT0037893 JH584746 3055939 3055999 - Vertebrata Vertebrata No 1 1
Cpo-Mir-459 cpo-mir-802 MIR-459 CAGUAAC MIMAT0047387 MIMAT0047388 scaffold_146 392819 392879 - Vertebrata Vertebrata No 1
Dno-Mir-459 dno-mir-802 MIR-459 CAGUAAC MIMAT0048014 MIMAT0048015 JH573390 2215448 2215508 + Vertebrata Vertebrata No 1
Dre-Mir-459 dre-mir-459 MIR-459 CAGUAAC MIMAT0001886 MIMAT0003408 chr1 1575493 1575555 + Vertebrata Vertebrata No 1
Ebu-Mir-459 None MIR-459 CAGUAAC None None FYBX02010397.1 1566507 1566568 + Vertebrata Vertebrata Unknown 1
Eca-Mir-459 eca-mir-802 MIR-459 CAGUAAC MIMAT0013183 None CM009173.1 33335417 33335477 + Vertebrata Vertebrata Unknown 1
Ete-Mir-459 None MIR-459 CAGUAAC None None JH980294 95364546 95364606 - Vertebrata Vertebrata No 1
Gmo-Mir-459 gmo-mir-459 MIR-459 CAGUAAC MIMAT0046048 MIMAT0046049 contig116338 245 307 - Vertebrata Vertebrata No
Hsa-Mir-459 hsa-mir-802 MIR-459 CAGUAAC MIMAT0004185 None chr21 35720731 35720791 + Vertebrata Vertebrata No
Laf-Mir-459 None MIR-459 CAGUAAC None None GL010040.1 20064816 20064877 - Vertebrata Vertebrata Unknown 1
Loc-Mir-459 None MIR-459 CAGUAAC None None LG14 27735894 27735956 - Vertebrata Vertebrata Unknown 1
Mal-Mir-459 None MIR-459 CAGUAAC None None KV885129.1 174998 175060 - Vertebrata Vertebrata Unknown 1
Mml-Mir-459 mml-mir-802 MIR-459 CAGUAAC MIMAT0006515 None CM014338.1 10864785 10864845 - Vertebrata Vertebrata Unknown 1
Mmr-Mir-459 None MIR-459 CAGUAAC None None CM007691.1 36832529 36832589 + Vertebrata Vertebrata Unknown 1
Mmu-Mir-459 mmu-mir-802 MIR-459 CAGUAAC MIMAT0004188 MIMAT0017240 chr16 93369737 93369797 + Vertebrata Vertebrata No 1
Mun-Mir-459 None MIR-459 CAGUAAC None None LR594638.1 67879828 67879892 - Vertebrata Vertebrata No 1 1
Oan-Mir-459 oan-mir-802 MIR-459 CAGUAAC MIMAT0007181 MIMAT0007182 NC_041744.1 21488371 21488431 + Vertebrata Vertebrata No 1
Ocu-Mir-459 ocu-mir-802 MIR-459 CAGUAAC MIMAT0048569 MIMAT0048570 chrUn0031 2484484 2484544 + Vertebrata Vertebrata Unknown 1
Pab-Mir-459 None MIR-459 CAGUAAC None None CM054701.2 46019563 46019623 + Vertebrata Vertebrata Unknown 1
Pma-Mir-459 pma-mir-459 MIR-459 CAGUAAC MIMAT0019555 None NW_022639232.1 6921 6983 - Vertebrata Vertebrata Unknown
Rno-Mir-459 rno-mir-802 MIR-459 CAGUAAC MIMAT0012840 MIMAT0017362 chr11 33570272 33570332 + Vertebrata Vertebrata No 1
Spt-Mir-459 None MIR-459 CAGUAAC None None QEPC01015537.1 853274 853334 + Vertebrata Vertebrata Unknown 1
Sto-Mir-459 None MIR-459 CAGUAAC None None BFAA01004456.1 233285 233346 - Vertebrata Vertebrata Unknown
Tni-Mir-459 None MIR-459 CAGUAAC None None 3 2976224 2976286 - Vertebrata Vertebrata Unknown
Xtr-Mir-459 None MIR-459 CAGUAAC None None chrUn_NW_016685808v1 496 556 - Vertebrata Vertebrata Unknown
Xla-Mir-459-P1 None MIR-459 CAGUAAC None None NC_030726.1 12629530 12629590 - X. laevis Vertebrata No
Xla-Mir-459-P2 None MIR-459 CAGUAAC None None NC_030727.1 20948137 20948197 + X. laevis Vertebrata No
Cin-Mir-4046 cin-mir-4046 MIR-4046 CAGUAAC MIMAT0016581 MIMAT0016582 HT000823.1 87428 87487 + C. intestinalis C. intestinalis No 1

(red - mature/co-mature, blue - star)

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