MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-216-P2a

Family name MIR-216 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-216-P2b 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2a  Aga-Mir-216-P2  Ami-Mir-216-P2a  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2a  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2a  Cja-Mir-216-P2a  Cli-Mir-216-P2a  Cmi-Mir-216-P2a  Cpi-Mir-216-P2a  Cpo-Mir-216-P2a  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2a  Dpu-Mir-216-P2  Dre-Mir-216-P2a  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2a2  Eca-Mir-216-P2a  Ete-Mir-216-P2a  Gga-Mir-216-P2a  Gja-Mir-216-P2a  Gmo-Mir-216-P2a  Hme-Mir-216-P2  Hsa-Mir-216-P2a  Isc-Mir-216-P2  Laf-Mir-216-P2a  Lch-Mir-216-P2a  Loc-Mir-216-P2a  Mal-Mir-216-P2a  Mdo-Mir-216-P2a  Mml-Mir-216-P2a  Mmr-Mir-216-P2a  Mmu-Mir-216-P2a  Oan-Mir-216-P2a  Ocu-Mir-216-P2a  Pab-Mir-216-P2a  Pbv-Mir-216-P2a  Pca-Mir-216-P2  Pma-Mir-216-P2a1  Pma-Mir-216-P2a2  Rno-Mir-216-P2a  Sha-Mir-216-P2a  Spt-Mir-216-P2a  Sto-Mir-216-P2a  Tca-Mir-216-P2  Tgu-Mir-216-P2a  Tni-Mir-216-P2a  Tur-Mir-216-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051813.1: 650193818-650193879 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2a)		 Mir-216-P2a CM051813.1: 650193818-650193879 [+] UCSC Ensembl
Mir-216-P2b CM051813.1: 650208194-650208255 [+] UCSC Ensembl
Mir-217-v2 CM051813.1: 650217086-650217146 [+] UCSC Ensembl
Mir-217-v1 CM051813.1: 650217087-650217145 [+] UCSC Ensembl
Seed AAUCUCU
Precursor
(pre-Mir +30nt flank)		 
UCCCAACCUGAACGUGAGUUACAGACUGGGAAAUCUCUGCAGGCAUAUGUGGUGUUGCUACAGUUAUCACACAAUUACCUGUAGAGAUUCUGCAAUCUGACAUCAUACAUCAGAUCUGUGCU
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Structure
        10        20           30        40        50        60
UCCCAACCUGAACGUGAGUUA--    C  -|   A          CAUA    GUGUUGCU 
                       CAGA UG GGAA UCUCUGCAGG    UGUG        A
                       GUCU AC UCUU AGAGAUGUCC    ACAC        C
UCGUGUCUAGACUACAUACUACA    A  G^   -          AUUA    ACUAUUGA 
120       110       100        90         80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-216-P2a_5p (predicted)
mirBase accessionNone
Sequence 
0- AAAUCUCUGCAGGCAUAUGUGG -22
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Star sequence

Neu-Mir-216-P2a_3p* (predicted)
mirBase accessionNone
Sequence 
40- ACAAUUACCUGUAGAGAUUCUG -62
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