MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-130-P1a

Family name MIR-130 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-130-P1b  Mun-Mir-130-P1c  Mun-Mir-130-P2a  Mun-Mir-130-P2b  Mun-Mir-130-P3a  Mun-Mir-130-P4a 
Orthologues Aca-Mir-130-P1a  Ami-Mir-130-P1a  Cli-Mir-130-P1a  Cmi-Mir-130-P1a  Cpi-Mir-130-P1a  Dre-Mir-130-P1a1  Dre-Mir-130-P1a2  Gga-Mir-130-P1a  Gja-Mir-130-P1a  Gmo-Mir-130-P1a1  Gmo-Mir-130-P1a2  Lch-Mir-130-P1a  Loc-Mir-130-P1a  Mal-Mir-130-P1a1  Mal-Mir-130-P1a2  Mdo-Mir-130-P1a  Oan-Mir-130-P1a  Pbv-Mir-130-P1a  Sha-Mir-130-P1a  Spt-Mir-130-P1a  Sto-Mir-130-P1a  Tgu-Mir-130-P1a  Tni-Mir-130-P1a2  Xla-Mir-130-P1a3  Xla-Mir-130-P1a4  Xtr-Mir-130-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594642.1: 57446084-57446142 [+]
Clustered miRNAs
(< 50kb from Mir-130-P1a)		 Mir-130-P1a LR594642.1: 57446084-57446142 [+]
Mir-130-P2a LR594642.1: 57447076-57447134 [+]
Mir-130-P3a LR594642.1: 57453690-57453753 [+]
Mir-130-P4a LR594642.1: 57454622-57454682 [+]
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
AAAGUGUGUGGAAUCUUGCUGUUGUCCAGAGCUCUUUUCUUGUUGGACUACUGGAAAUUAUGAUGAGCAGUGCAAUAUUAAAAGGGCAUUGGCUGGCAGUAACAUGACCCCUUUAAAUA
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Structure
        10          20        30        40        50         
AAAGUGUGUGGAAUCUU--|      U    A        CU     G   A  GGAAAU 
                   GCUGUUG CCAG GCUCUUUU  UGUUG ACU CU      \
                   UGACGGU GGUU CGGGAAAA  AUAAC UGA GA      U
AUAAAUUUCCCCAGUACAA^      C    A        UU     G   C  GUAGUA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
To
Star sequence

Mun-Mir-130-P1a_5p*
mirBase accessionNone
Sequence 
0- GCUCUUUUCUUGUUGGACUACU -22
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Mature sequence

Mun-Mir-130-P1a_3p
mirBase accessionNone
Sequence 
37- CAGUGCAAUAUUAAAAGGGCAU -59
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