MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-130-P1b

Family name MIR-130 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-130-P1a  Mun-Mir-130-P1c  Mun-Mir-130-P2a  Mun-Mir-130-P2b  Mun-Mir-130-P3a  Mun-Mir-130-P4a 
Orthologues Aca-Mir-130-P1b  Ami-Mir-130-P1b  Cli-Mir-130-P1b  Cmi-Mir-130-P1b  Cpi-Mir-130-P1b  Dre-Mir-130-P1b1  Gga-Mir-130-P1b  Gja-Mir-130-P1b  Lch-Mir-130-P1b  Loc-Mir-130-P1b  Mdo-Mir-130-P1b  Oan-Mir-130-P1b  Pbv-Mir-130-P1b  Sha-Mir-130-P1b  Spt-Mir-130-P1b  Sto-Mir-130-P1b  Tgu-Mir-130-P1b  Xla-Mir-130-P1b3  Xla-Mir-130-P1b4  Xtr-Mir-130-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594644.1: 50510895-50510957 [+]
Clustered miRNAs
(< 50kb from Mir-130-P1b)		 Mir-130-P1b LR594644.1: 50510895-50510957 [+]
Mir-130-P2b LR594644.1: 50511168-50511225 [+]
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
AUAACUUUUCUUGAAUGAAAUCUGUCCAGUGCCCUUUUUAUGUUGUACUACUAGUGACCAAACACACAAAGCAGUGCAAUGUUAAAAGGGCAUUGGCCAGUGUCACUGUCCUCAUGUUUUGCU
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Structure
        10        20          30        40        50        60 
AUAACUUUUCUUGAAUGAAAU--|  U             U          A  AGUGACCA 
                       CUG CCAGUGCCCUUUU AUGUUGUACU CU        \
                       GAC GGUUACGGGAAAA UGUAACGUGA GA        A
UCGUUUUGUACUCCUGUCACUGU^  C             U          C  AACACACA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Mun-Mir-130-P1b_5p*
mirBase accessionNone
Sequence 
0- GCCCUUUUUAUGUUGUACUACU -22
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Mature sequence

Mun-Mir-130-P1b_3p
mirBase accessionNone
Sequence 
41- CAGUGCAAUGUUAAAAGGGCAU -63
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