MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-875

Family name MIR-875 (all species)
Seed AUACCUC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-875
Paralogues
Orthologues Aca-Mir-875  Ami-Mir-875  Bta-Mir-875  Cfa-Mir-875  Cli-Mir-875  Cpi-Mir-875  Ebu-Mir-875  Ete-Mir-875  Gja-Mir-875  Hsa-Mir-875  Mdo-Mir-875  Mmu-Mir-875  Mun-Mir-875  Oan-Mir-875  Ocu-Mir-875  Pbv-Mir-875  Pma-Mir-875  Rno-Mir-875  Sha-Mir-875  Spt-Mir-875 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr8: 98198726-98198781 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-875)
Mir-599 chr8: 98198579-98198637 [-] UCSC Ensembl
Mir-875 chr8: 98198726-98198781 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGGAAAAUUCUUAAAGUUUAGUGGUACUAUACCUCAGUUUUAUCAGGUGUUCCUAAAAUCACCUGGAAAUACUGAGGUUGUGUCUCACUGAACGCAAGCUACGUGACUUCUAU
Get precursor sequence
Structure
        10          20        30        40        50       
UUUUGGAAAAUUCUUAAA--|       GU  UAU        U  A       UUCC 
                    GUUUAGUG  AC   ACCUCAGU UU UCAGGUG    U
                    CAAGUCAC  UG   UGGAGUCA AA GGUCCAC    A
UAUCUUCAGUGCAUCGAACG^       UC  UGU        U  A       UAAA 
    110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-875_5p

mirBase accessionMIMAT0006517
Sequence
0- UAUACCUCAGUUUUAUCAGGUG -22
Get sequence
Proposed targets TargetScanVert: mml-miR-875-5p
Star sequence

Mml-Mir-875_3p*

mirBase accessionMIMAT0006518
Sequence
34- CCUGGAAAUACUGAGGUUGUGU -56
Get sequence
Proposed targets TargetScanVert: mml-miR-875-3p