MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-135-P4b

Family name MIR-135 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-135-P1  Mal-Mir-135-P2a  Mal-Mir-135-P2b  Mal-Mir-135-P4a 
Orthologues Aca-Mir-135-P4  Ami-Mir-135-P4  Bta-Mir-135-P4  Cfa-Mir-135-P4  Cja-Mir-135-P4  Cli-Mir-135-P4  Cmi-Mir-135-P4  Cpi-Mir-135-P4  Cpo-Mir-135-P4  Dno-Mir-135-P4  Dre-Mir-135-P4b  Eca-Mir-135-P4  Ete-Mir-135-P4  Gga-Mir-135-P4  Gja-Mir-135-P4  Gmo-Mir-135-P4b  Hsa-Mir-135-P4  Laf-Mir-135-P4  Lch-Mir-135-P4  Loc-Mir-135-P4  Mdo-Mir-135-P4  Mml-Mir-135-P4  Mmr-Mir-135-P4  Mmu-Mir-135-P4  Mun-Mir-135-P4  Neu-Mir-135-P4  Oan-Mir-135-P4  Ocu-Mir-135-P4  Pab-Mir-135-P4  Pbv-Mir-135-P4  Rno-Mir-135-P4  Sha-Mir-135-P4  Spt-Mir-135-P4  Sto-Mir-135-P4  Tgu-Mir-135-P4  Tni-Mir-135-P4b  Xla-Mir-135-P4  Xtr-Mir-135-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884806.1: 367986-368047 [-] UCSC Ensembl
Seed AUGGCUU
Precursor
(pre-Mir +30nt flank)		 
UGUCUUCCAAAUCAAACCACACUUGUGUCUUAUGGCUUUCUAUUCCUAUGUGAAUUCUUUCUAACAUGUCAUGUAGGGUUUAAAGCCAUUGGAUACAACAUGGAAAAUCAACCUUUGUUUUU
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Structure
        10         20         30        40        50        60 
UGUCUUCCAAAUCAAACCA-  C-|       U        CUAU          AUUCUUU 
                    CA  UUGUGUCU AUGGCUUU    UCCUAUGUGA       \
                    GU  AACAUAGG UACCGAAA    GGGAUGUACU       C
UUUUUGUUUCCAACUAAAAG  AC^       U        UUU-          GUACAAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-135-P4b_5p
mirBase accessionNone
Sequence 
0- UAUGGCUUUCUAUUCCUAUGUGA -23
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Star sequence

Mal-Mir-135-P4b_3p*
mirBase accessionNone
Sequence 
40- AUGUAGGGUUUAAAGCCAUUGG -62
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