| MirGeneDB ID | Mal-Mir-135-P1 |
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| Family name |
MIR-135 (all species) |
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| Seed |
AUGGCUU |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
Mal-Mir-135-P2a
Mal-Mir-135-P2b
Mal-Mir-135-P4a
Mal-Mir-135-P4b
|
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| Orthologues |
Aca-Mir-135-P1
Ami-Mir-135-P1
Bta-Mir-135-P1
Cfa-Mir-135-P1
Cli-Mir-135-P1
Cmi-Mir-135-P1
Cpi-Mir-135-P1
Cpo-Mir-135-P1
Dno-Mir-135-P1
Dre-Mir-135-P1
Ete-Mir-135-P1
Gga-Mir-135-P1
Gja-Mir-135-P1
Gmo-Mir-135-P1
Hsa-Mir-135-P1
Lch-Mir-135-P1
Loc-Mir-135-P1
Mml-Mir-135-P1
Mmu-Mir-135-P1
Mun-Mir-135-P1
Oan-Mir-135-P1
Ocu-Mir-135-P1
Pbv-Mir-135-P1
Pma-Mir-135-o1
Rno-Mir-135-P1
Spt-Mir-135-P1
Sto-Mir-135-P1
Tgu-Mir-135-P1
Tni-Mir-135-P1
|
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| Node of Origin (locus) |
Gnathostomata
|
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| Node of Origin (family) |
Chordata
|
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884993.1: 327112-327171 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUUUGUCAUCUUCCAAUGCCCAGUGCGCUGUAUGGCUUUUUAUUCCUAUCUGACUGUACUAAUGGUUCAUAUAGGGAUGGAAGCCAUGCAAUGCGCUGGGAGCCCAGCACACUGGACCAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUUUGUCAUCUUCCAAUG--| C U C CUGUAC
CCCAGUGCG UGUAUGGCUUUU AUUCCUAU UGA \
GGGUCGCGU ACGUACCGAAGG UAGGGAUA ACU U
UACCAGGUCACACGACCCGA^ A - U UGGUAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Mature sequence |
Mal-Mir-135-P1_5p |
| mirBase accession | None |
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| Sequence |
0- UAUGGCUUUUUAUUCCUAUCUGA -23
Get sequence
|
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| Star sequence |
Mal-Mir-135-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AUAUAGGGAUGGAAGCCAUGCA -60
Get sequence
|
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