MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-315-P6-v2

Family name MIR-315 (all species)
Seed UUGAUUG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-315-P3  Lpo-Mir-315-P4  Lpo-Mir-315-P5  Lpo-Mir-315-P6-v1 
Orthologues Aae-Mir-315  Bge-Mir-315  Bpl-Mir-315  Cbr-Mir-315  Cel-Mir-315  Csc-Mir-315  Cte-Mir-315  Dan-Mir-315  Dma-Mir-315  Dme-Mir-315  Dmo-Mir-315  Dpu-Mir-315  Dsi-Mir-315  Dya-Mir-315  Efe-Mir-315  Esc-Mir-315  Isc-Mir-315  Lan-Mir-315  Lgi-Mir-315  Npo-Mir-315  Obi-Mir-315  Ovu-Mir-315  Pfl-Mir-315  Pma-Mir-315  Sko-Mir-315  Sme-Mir-315  Tca-Mir-315 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013673982.1: 2298-2353 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUAUUAAGAAAUACUUUGUCUUCUCGCCUUUUGAUUGUUGCUCAGAAUGCGUGGGUUUGUCAGGCUUUCGAGCAAUGAUCAAACGCUGAGGAGAUCUAGUUUCAUCCAGUACCAG
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Structure
        10          20         30        40        50        
CUUAUUAAGAAAUACUUU--        -| CU      UG      A   U  G GGGU 
                    GUCUUCUC GC  UUUGAU  UUGCUC GAA GC U    \
                    UAGAGGAG CG  AAACUA  AACGAG CUU CG A    U
GACCAUGACCUACUUUGAUC        U^ C-      GU      -   U  G CUGU 
    110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-315-P6-v2_5p
mirBase accessionNone
Sequence 
0- UUUGAUUGUUGCUCAGAAUGCGU -23
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Star sequence

Lpo-Mir-315-P6-v2_3p*
mirBase accessionNone
Sequence 
34- GCUUUCGAGCAAUGAUCAAACG -56
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