Mir-7-P1

MirGeneDB ID

Hsa-Mir-7-P1

Family name

MIR-7 (all species)

Seed

GGAAGAC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-7-2

Paralogues

Hsa-Mir-7-P2 Hsa-Mir-7-P4

Orthologues

Aae-Mir-7 Aca-Mir-7-P1 Ami-Mir-7-P1 Asu-Mir-7 Bfl-Mir-7 Bge-Mir-7 Bla-Mir-7 Bta-Mir-7-P1 Cfa-Mir-7-P1 Cgi-Mir-7 Cin-Mir-7 Cli-Mir-7-P1 Cmi-Mir-7-P1 Cpi-Mir-7-P1 Cpo-Mir-7-P1 Cte-Mir-7 Dan-Mir-7 Dma-Mir-7 Dme-Mir-7 Dmo-Mir-7 Dno-Mir-7-P1 Dre-Mir-7-P1a Dre-Mir-7-P1b Dsi-Mir-7 Dya-Mir-7 Esc-Mir-7 Ete-Mir-7-P1 Gga-Mir-7-P1 Gja-Mir-7-P1 Gmo-Mir-7-P1a Gmo-Mir-7-P1b Hme-Mir-7 Isc-Mir-7 Lan-Mir-7 Lch-Mir-7-P1 Lgi-Mir-7 Loc-Mir-7-P1 Lpo-Mir-7 Mal-Mir-7-P1a Mdo-Mir-7-P1 Mml-Mir-7-P1 Mmu-Mir-7-P1 Mun-Mir-7-P1e Mun-Mir-7-P1f Npo-Mir-7 Oan-Mir-7-P1 Obi-Mir-7 Ocu-Mir-7-P1 Ovu-Mir-7 Pbv-Mir-7-P1 Pfl-Mir-7 Pma-Mir-7-o1 Pmi-Mir-7 Rno-Mir-7-P1 Sha-Mir-7-P1 Sko-Mir-7 Spt-Mir-7-P1 Spu-Mir-7 Sto-Mir-7-P1 Tca-Mir-7 Tgu-Mir-7-P1 Xbo-Mir-7 Xla-Mir-7-P1c Xla-Mir-7-P1d Xtr-Mir-7-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr15: 88611856-88611917 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGGAUACAGAGUGGACCGGCUGGCCCCAUCUGGAAGACUAGUGAUUUUGUUGUUGUCUUACUGCGCUCAACAACAAAUCCCAGUCUACCUAAUGGUGCCAGCCAUCGCAGCGGGGUGCAGGA

Get precursor sequence

Structure

        10          20        30        40        50        60 
UGGAUACAGAGUGGACC--|      C    CU  A     AGU     U      GUCUUA 
                   GGCUGGC CCAU  GG AGACU   GAUUU GUUGUU      C
                   CCGACCG GGUA  CC UCUGA   CUAAA CAACAA      U
AGGACGUGGGGCGACGCUA^      U    AU  A     CC-     -      CUCGCG 
120       110       100        90        80          70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-7-P1_5p

mirBase accession

MIMAT0000252

Sequence

0- UGGAAGACUAGUGAUUUUGUUGUU -24

Get sequence

Proposed targets

microrna.org: MIMAT0000252
TargetScanVert: hsa-miR-7-5p
TargetMiner: hsa-miR-7-5p
miRDB: MIMAT0000252

Star sequence

Hsa-Mir-7-P1_3p*

mirBase accession

MIMAT0004554

Sequence

40- CAACAAAUCCCAGUCUACCUAA -62

Get sequence

Proposed targets

microrna.org: MIMAT0004554
TargetScanVert: hsa-miR-7-2-3p
TargetMiner: hsa-miR-7-2-3p
miRDB: MIMAT0004554