MirGeneDB ID | Hsa-Mir-7-P1 |
Family name |
MIR-7 (all species) |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-mir-7-2
|
Paralogues |
Hsa-Mir-7-P2
Hsa-Mir-7-P4
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Orthologues |
Aae-Mir-7
Aca-Mir-7-P1
Aga-Mir-7
Agr-Mir-7
Ami-Mir-7-P1
Asu-Mir-7
Bfl-Mir-7
Bge-Mir-7
Bla-Mir-7
Bta-Mir-7-P1
Cfa-Mir-7-P1
Cin-Mir-7
Cja-Mir-7-P1
Cli-Mir-7-P1
Cmi-Mir-7-P1
Cpi-Mir-7-P1
Cpo-Mir-7-P1
Cte-Mir-7
Dan-Mir-7
Dlo-Mir-7
Dma-Mir-7
Dme-Mir-7
Dmo-Mir-7
Dno-Mir-7-P1
Dre-Mir-7-P1a
Dre-Mir-7-P1b
Dsi-Mir-7
Dya-Mir-7
Eba-Mir-7
Eca-Mir-7-P1
Esc-Mir-7
Ete-Mir-7-P1
Gga-Mir-7-P1
Gja-Mir-7-P1
Gmo-Mir-7-P1a
Gmo-Mir-7-P1b
Gpa-Mir-7
Gsa-Mir-7
Gsp-Mir-7
Hme-Mir-7
Hmi-Mir-7
Hru-Mir-7
Isc-Mir-7
Laf-Mir-7-P1
Lan-Mir-7
Lch-Mir-7-P1
Lgi-Mir-7
Llo-Mir-7
Loc-Mir-7-P1
Lpo-Mir-7
Mal-Mir-7-P1a
Mdo-Mir-7-P1
Mgi-Mir-7
Mml-Mir-7-P1
Mmr-Mir-7-P1
Mmu-Mir-7-P1
Mom-Mir-7
Mun-Mir-7-P1e
Mun-Mir-7-P1f
Neu-Mir-7-P1
Npo-Mir-7
Oan-Mir-7-P1
Obi-Mir-7
Ocu-Mir-7-P1
Ofu-Mir-7
Ovu-Mir-7
Pab-Mir-7-P1
Pau-Mir-7
Pbv-Mir-7-P1
Pca-Mir-7
Pcr-Mir-7
Pdu-Mir-7
Pfl-Mir-7
Pma-Mir-7-o1
Pmi-Mir-7
Pve-Mir-7
Rno-Mir-7-P1
Rph-Mir-7
Sha-Mir-7-P1
Sko-Mir-7
Sne-Mir-7
Snu-Mir-7
Spt-Mir-7-P1
Spu-Mir-7
Sro-Mir-7
Sto-Mir-7-P1
Tca-Mir-7
Tgu-Mir-7-P1
War-Mir-7
Xbo-Mir-7
Xla-Mir-7-P1c
Xla-Mir-7-P1d
Xtr-Mir-7-P1
|
Node of Origin (locus) |
Gnathostomata
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Node of Origin (family) |
Bilateria
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Genome context (hg38) |
chr15: 88611856-88611917 [+]
UCSC
Ensembl
|
Seed |
GGAAGAC |
Precursor (pre-Mir +30nt flank) |
UGGAUACAGAGUGGACCGGCUGGCCCCAUCUGGAAGACUAGUGAUUUUGUUGUUGUCUUACUGCGCUCAACAACAAAUCCCAGUCUACCUAAUGGUGCCAGCCAUCGCAGCGGGGUGCAGGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGGAUACAGAGUGGACC--| C CU A AGU U GUCUUA
GGCUGGC CCAU GG AGACU GAUUU GUUGUU C
CCGACCG GGUA CC UCUGA CUAAA CAACAA U
AGGACGUGGGGCGACGCUA^ U AU A CC- - CUCGCG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
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Mature sequence |
Hsa-Mir-7-P1_5p |
mirBase accession | MIMAT0000252 |
Sequence |
0- UGGAAGACUAGUGAUUUUGUUGUU -24
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000252
TargetScanVert: hsa-miR-7-5p
TargetMiner: hsa-miR-7-5p
miRDB: MIMAT0000252
|
Star sequence |
Hsa-Mir-7-P1_3p* |
mirBase accession | MIMAT0004554 |
Sequence |
40- CAACAAAUCCCAGUCUACCUAA -62
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004554
TargetScanVert: hsa-miR-7-2-3p
TargetMiner: hsa-miR-7-2-3p
miRDB: MIMAT0004554
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