Mir-7-P4

MirGeneDB ID

Hsa-Mir-7-P4

Family name

MIR-7 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-7-3

Paralogues

Hsa-Mir-7-P1 Hsa-Mir-7-P2

Orthologues

Aae-Mir-7 Aca-Mir-7-P4 Aga-Mir-7 Agr-Mir-7 Ami-Mir-7-P4 Asu-Mir-7 Bfl-Mir-7 Bge-Mir-7 Bla-Mir-7 Bta-Mir-7-P4 Cfa-Mir-7-P4 Cin-Mir-7 Cja-Mir-7-P4 Cli-Mir-7-P4 Cmi-Mir-7-P4 Cpi-Mir-7-P4 Cpo-Mir-7-P4 Cte-Mir-7 Dan-Mir-7 Dlo-Mir-7 Dma-Mir-7 Dme-Mir-7 Dmo-Mir-7 Dno-Mir-7-P4 Dre-Mir-7-P4b Dsi-Mir-7 Dya-Mir-7 Eba-Mir-7 Eca-Mir-7-P4 Esc-Mir-7 Ete-Mir-7-P4 Gga-Mir-7-P4 Gja-Mir-7-P4 Gmo-Mir-7-P4a Gpa-Mir-7 Gsa-Mir-7 Gsp-Mir-7 Hme-Mir-7 Hmi-Mir-7 Hru-Mir-7 Isc-Mir-7 Laf-Mir-7-P4 Lan-Mir-7 Lch-Mir-7-P4 Lgi-Mir-7 Llo-Mir-7 Loc-Mir-7-P4 Loc-Mir-7-P4-as Lpo-Mir-7 Mal-Mir-7-P4a Mdo-Mir-7-P4 Mgi-Mir-7 Mml-Mir-7-P4 Mmr-Mir-7-P4 Mmu-Mir-7-P4 Mom-Mir-7 Mun-Mir-7-P4 Neu-Mir-7-P4 Npo-Mir-7 Obi-Mir-7 Ocu-Mir-7-P4 Ofu-Mir-7 Ovu-Mir-7 Pab-Mir-7-P4 Pau-Mir-7 Pbv-Mir-7-P4 Pca-Mir-7 Pcr-Mir-7 Pdu-Mir-7 Pfl-Mir-7 Pma-Mir-7-o4 Pmi-Mir-7 Pve-Mir-7 Rno-Mir-7-P4 Rph-Mir-7 Sha-Mir-7-P4 Sko-Mir-7 Sne-Mir-7 Snu-Mir-7 Spt-Mir-7-P4 Spu-Mir-7 Sro-Mir-7 Sto-Mir-7-P4 Tca-Mir-7 Tgu-Mir-7-P4 War-Mir-7 Xbo-Mir-7

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr19: 4770700-4770759 [+] UCSC Ensembl

Seed

GGAAGAC

Precursor
(pre-Mir +30nt flank)

AGAUUAGAGUGGCUGUGGUCUAGUGCUGUGUGGAAGACUAGUGAUUUUGUUGUUCUGAUGUACUACGACAACAAGUCACAGCCGGCCUCAUAGCGCAGACUCCCUUCGACCUUCGCCUUC

Get precursor sequence

Structure

        10           20        30        40        50        60
AGAUUAGAGUGGCUGUG---|   A        U  AAGA  A       U      CUGAU 
                    GUCU GUGCUGUG GG    CU GUGAUUU GUUGUU     G
                    CAGA CGCGAUAC CC    GA CACUGAA CAACAG     U
CUUCCGCUUCCAGCUUCCCU^   -        U  GGCC  -       -      CAUCA 
.       110       100         90        80          70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-7-P4_5p

mirBase accession

MIMAT0000252

Sequence

0- UGGAAGACUAGUGAUUUUGUUGUU -24

Get sequence

Proposed targets

microrna.org: MIMAT0000252
TargetScanVert: hsa-miR-7-5p
TargetMiner: hsa-miR-7-5p
miRDB: MIMAT0000252

Star sequence

Hsa-Mir-7-P4_3p*

mirBase accession

None

Sequence

38- CAACAAGUCACAGCCGGCCUCA -60

Get sequence