MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-96-P2g

Family name MIR-96 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-96-P1  Bla-Mir-96-P2f  Bla-Mir-96-P2h  Bla-Mir-96-P2i  Bla-Mir-96-P2j  Bla-Mir-96-P2k  Bla-Mir-96-P3 
Orthologues Aae-Mir-96-P2  Aca-Mir-96-P2  Aga-Mir-96-P2  Agr-Mir-96-P2  Ami-Mir-96-P2  Asu-Mir-96-P2  Ava-Mir-96-o2  Bfl-Mir-96-P2g  Bge-Mir-96-P2  Bta-Mir-96-P2  Cel-Mir-96-P2  Cfa-Mir-96-P2  Cin-Mir-96-P2  Cja-Mir-96-P2  Cli-Mir-96-P2  Cmi-Mir-96-P2  Cpi-Mir-96-P2  Cpo-Mir-96-P2  Cte-Mir-96-P2  Dan-Mir-96-P2  Dlo-Mir-96-P2  Dma-Mir-96-P2-v1  Dme-Mir-96-P2  Dno-Mir-96-P2  Dpu-Mir-96-P2-v1  Dsi-Mir-96-P2  Dya-Mir-96-P2  Eba-Mir-96-P2  Eca-Mir-96-P2  Ete-Mir-96-P2  Gga-Mir-96-P2  Gja-Mir-96-P2  Gpa-Mir-96-P2  Hme-Mir-96-P2  Hru-Mir-96-P2  Hsa-Mir-96-P2  Isc-Mir-96-P2  Laf-Mir-96-P2  Lan-Mir-96-P2  Lch-Mir-96-P2  Lgi-Mir-96-P2  Lhy-Mir-96-P2  Llo-Mir-96-P2-v1  Loc-Mir-96-P2  Mdo-Mir-96-P2  Mml-Mir-96-P2  Mmr-Mir-96-P2  Mmu-Mir-96-P2  Mun-Mir-96-P2  Neu-Mir-96-P2  Npo-Mir-96-P2  Oan-Mir-96-P2  Obi-Mir-96-P2  Ocu-Mir-96-P2  Ofu-Mir-96-P2  Ovu-Mir-96-P2  Pab-Mir-96-P2  Pau-Mir-96-P2  Pbv-Mir-96-P2  Pca-Mir-96-P2  Pdu-Mir-96-P2  Pfl-Mir-96-P2  Pmi-Mir-96-P2  Pve-Mir-96-P2  Rno-Mir-96-P2  Rph-Mir-96-P2  Sha-Mir-96-P2  Sko-Mir-96-P2  Snu-Mir-96-P2  Spt-Mir-96-P2  Spu-Mir-96-P2  Sto-Mir-96-P2  Tca-Mir-96-P2  Tgu-Mir-96-P2  Tur-Mir-96-P2  War-Mir-96-P2  Xtr-Mir-96-P2 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 xfSc0001431: 1772-1836 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-96-P2g)		 Mir-96-P2f xfSc0001431: 1462-1540 [+] Ensembl
Mir-96-P2g xfSc0001431: 1772-1836 [+] Ensembl
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)		 
GAUCUUCGCUAUAACCUCUGGGUCAGCUUGCUUGGCACUUGUGGAAUUUUUUGCUCGACAAGACUUUGUGUCAAAGAAUUCCCCAGUACUAAGCACGCUGGCCUAGGAUGUCUGGUGAUGUACAG
Get precursor sequence
Structure
        10          20        30        40        50        60  
GAUCUUCGCUAUAACCU--|         U       C   U U           CUCGACAA 
                   CUGGGUCAGC UGCUUGG ACU G GGAAUUUUUUG        G
                   GAUCCGGUCG ACGAAUC UGA C CCUUAAGAAAC        A
GACAUGUAGUGGUCUGUAG^         C       A   - C           UGUGUUUC 
   120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-96-P2g_5p
mirBase accessionNone
Sequence 
0- CUUGGCACUUGUGGAAUUUUUUG -23
Get sequence
Star sequence

Bla-Mir-96-P2g_3p*
mirBase accessionNone
Sequence 
43- AAGAAUUCCCCAGUACUAAGCA -65
Get sequence