MirGeneDB 3.0
52 microRNA genes with node of origin P. dumerilii
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pdu-Bantam-P25 None BANTAM GAGAUCA None None JAPTHN010000002.1 72665914 72665975 - P. dumerilii Protostomia No 1
Pdu-Bantam-P26 None BANTAM GAGAUCA None None JAPTHN010000002.1 72666495 72666557 - P. dumerilii Protostomia No 1
Pdu-Mir-2-o25 V None MIR-2 AUCACAG None None JAPTHN010000003.1 67086277 67086336 + P. dumerilii Protostomia 2 No 1
Pdu-Mir-2-o26 None MIR-2 AUCACAG None None JAPTHN010000003.1 67087490 67087548 + P. dumerilii Protostomia No
Pdu-Mir-2-o27 None MIR-2 AUCACAG None None JAPTHN010000003.1 67087901 67087958 + P. dumerilii Protostomia No 1 1
Pdu-Mir-2-o28 None MIR-2 AUCACAG None None JAPTHN010000003.1 67088098 67088157 + P. dumerilii Protostomia No 1
Pdu-Mir-2-o29 None MIR-2 AUCACAG None None JAPTHN010000003.1 67088403 67088463 + P. dumerilii Protostomia No 1
Pdu-Mir-2-o30 None MIR-2 AUCACAG None None JAPTHN010000003.1 67088840 67088898 + P. dumerilii Protostomia No 1
Pdu-Mir-2-o31 None MIR-2 AUCACAG None None JAPTHN010000003.1 66418562 66418621 + P. dumerilii Protostomia No
Pdu-Mir-2-o32 None MIR-2 AUCACAG None None JAPTHN010000003.1 66418751 66418810 + P. dumerilii Protostomia No 1
Pdu-Mir-2-o33 None MIR-2 AUCACAG None None JAPTHN010000003.1 66419072 66419128 + P. dumerilii Protostomia No 1 1
Pdu-Mir-2-o34 None MIR-2 AUCACAG None None JAPTHN010000003.1 66419295 66419351 + P. dumerilii Protostomia No 1
Pdu-Mir-2-o35 None MIR-2 AUCACAG None None JAPTHN010000003.1 66419578 66419640 + P. dumerilii Protostomia No 1
Pdu-Mir-10-P4-as None MIR-10 ACCUGUA None None JAPTHN010000027.1 3633350 3633412 + P. dumerilii Eumetazoa No 1
Pdu-Mir-87-o33 None MIR-87 UGAGCAA None None JAPTHN010000001.1 126238903 126238960 + P. dumerilii Protostomia No 1
Pdu-Mir-92-o136 None MIR-92 AUUGCAC None None JAPTHN010000001.1 194084058 194084116 - P. dumerilii Bilateria No
Pdu-Mir-92-o137 None MIR-92 AUUGCAC None None JAPTHN010000001.1 194083611 194083668 - P. dumerilii Bilateria No 1
Pdu-Mir-92-o138 None MIR-92 AUUGCAC None None JAPTHN010000001.1 194081867 194081923 - P. dumerilii Bilateria No
Pdu-Mir-96-P1v None MIR-96 UUGGCAC None None JAPTHN010000001.1 165849565 165849622 - P. dumerilii Bilateria No 1 1
Pdu-Mir-96-P1w None MIR-96 UUUGGCA None None JAPTHN010000039.1 3782469 3782528 - P. dumerilii Bilateria No 1
Pdu-Mir-96-P1x None MIR-96 UUUGGCA None None JAPTHN010000039.1 3780734 3780790 - P. dumerilii Bilateria No 1 1
Pdu-Mir-210-P5 None MIR-210 UGUGCGU None None JAPTHN010000010.1 1599740 1599799 - P. dumerilii Bilateria No
Pdu-Mir-210-P7 None MIR-210 UUGUGCG None None JAPTHN010000010.1 1472008 1472068 - P. dumerilii Bilateria No 1
Pdu-Mir-242-P4a None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826411 29826473 + P. dumerilii Nephrozoa No
Pdu-Mir-242-P4b None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826777 29826839 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4c None MIR-242 UGCGUAG None None JAPTHN010000007.1 29827092 29827154 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4d None MIR-242 UGCGUAG None None JAPTHN010000007.1 29836784 29836846 + P. dumerilii Nephrozoa No 1
Pdu-Mir-279-o44 None MIR-279 GACUAGA None None JAPTHN010000001.1 184772430 184772489 - P. dumerilii Protostomia No 1
Pdu-Mir-279-o45 None MIR-279 GACUAGA None None JAPTHN010000009.1 2657711 2657763 - P. dumerilii Protostomia No 1 1
Pdu-Mir-279-o46 None MIR-279 GACUAGA None None JAPTHN010000003.1 17716402 17716456 + P. dumerilii Protostomia No 1
Pdu-Mir-279-o47 None MIR-279 UGACUGU None None JAPTHN010000003.1 90160575 90160628 - P. dumerilii Protostomia No 1 1
Pdu-Mir-1989-P5 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38603736 38603796 - P. dumerilii Platytrochozoa No 1
Pdu-Mir-1989-P6 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38603310 38603366 - P. dumerilii Platytrochozoa No
Pdu-Mir-1989-P7 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38602894 38602950 - P. dumerilii Platytrochozoa Unknown 1
Pdu-Mir-1989-P8 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38602629 38602685 - P. dumerilii Platytrochozoa No 1
Pdu-Mir-1989-P9 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38602338 38602394 - P. dumerilii Platytrochozoa No 1
Pdu-Mir-1989-P10 None MIR-1989 CAGCUGU None None JAPTHN010000010.1 38602059 38602115 - P. dumerilii Platytrochozoa No 1
Pdu-Mir-1996-o1 None MIR-1996 UCAAGUG None None JAPTHN010000001.1 189983201 189983260 - P. dumerilii Sipuncula + Pleistoannelida No 1 1
Pdu-Mir-1996-o2 None MIR-1996 UCAAGUG None None JAPTHN010000001.1 189982418 189982474 - P. dumerilii Sipuncula + Pleistoannelida No 1 1
Pdu-Mir-2691-P1 None MIR-2691 ACGGUGA None None JAPTHN010000004.1 75689506 75689564 - P. dumerilii Sipuncula + Pleistoannelida No 1
Pdu-Mir-2691-P2a None MIR-2691 UUUUGCA None None JAPTHN010000044.1 156338 156395 + P. dumerilii Sipuncula + Pleistoannelida No 1
Pdu-Mir-2691-P2b None MIR-2691 UUUUGCA None None JAPTHN010000297.1 185455 185512 - P. dumerilii Sipuncula + Pleistoannelida No 1
Pdu-Mir-2691-P3 None MIR-2691 UUUGCAA None None JAPTHN010000012.1 16062901 16062959 + P. dumerilii Sipuncula + Pleistoannelida Unknown 1 1
Pdu-Mir-2691-P4 None MIR-2691 UUUGCAA None None JAPTHN010000012.1 26857283 26857341 + P. dumerilii Sipuncula + Pleistoannelida No 1 1
Pdu-Mir-2691-P5 V None MIR-2691 UUUUGCA None None JAPTHN010000027.1 5652968 5653026 - P. dumerilii Sipuncula + Pleistoannelida 2 No
Pdu-Novel-1 None PDU-NOVEL-1 CUGUUCG None None JAPTHN010000001.1 123154193 123154248 + P. dumerilii P. dumerilii No 1
Pdu-Novel-2 None PDU-NOVEL-2 AGCACCG None None JAPTHN010000015.1 6298127 6298183 - P. dumerilii P. dumerilii No 1
Pdu-Novel-3 None PDU-NOVEL-3 GCAGAGA None None JAPTHN010000007.1 5573703 5573761 - P. dumerilii P. dumerilii No 1 1
Pdu-Novel-4 V None PDU-NOVEL-4 ACGAAUC None None JAPTHN010000027.1 675354 675412 - P. dumerilii P. dumerilii 2 No 1
Pdu-Novel-5 None PDU-NOVEL-5 AAGCACC None None JAPTHN010000024.1 3948703 3948768 - P. dumerilii P. dumerilii No
Pdu-Novel-6 None PDU-NOVEL-6 GACUCUU None None JAPTHN010000028.1 2394592 2394652 - P. dumerilii P. dumerilii No
Pdu-Novel-7 None PDU-NOVEL-7 UUUUGCU None None JAPTHN010000001.1 55158100 55158157 - P. dumerilii P. dumerilii No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all