MirGeneDB 3.0
34 microRNA genes with seed CACAGCC
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Mml-Novel-1 None MML-NOVEL-1 CACAGCC None None CM014350.1 108279013 108279073 - M. mulatta M. mulatta No 1
Tca-Mir-2-P1 V tca-mir-2-3 MIR-2 CACAGCC MIMAT0019093 MIMAT0008353 LG3 560832 560890 + Arthropoda Protostomia 2 No 1
Gpa-Mir-2-P1 V None MIR-2 CACAGCC None None Scaffold379 74466 74531 - Arthropoda Protostomia 2 No
Dya-Mir-2-P1 V dya-mir-2c MIR-2 CACAGCC None MIMAT0009097 3R 15188380 15188446 + Arthropoda Protostomia 2 No
Dsi-Mir-2-P1 V dsi-mir-2c MIR-2 CACAGCC None MIMAT0008854 3R 9985314 9985380 + Arthropoda Protostomia 2 No
Dme-Mir-2-P1 V dme-mir-2c MIR-2 CACAGCC MIMAT0020845 MIMAT0000411 3R 15417760 15417826 - Arthropoda Protostomia 2 No
Dan-Mir-2-P1 V dan-mir-2c MIR-2 CACAGCC None MIMAT0008442 scaffold_13340 12827849 12827913 - Arthropoda Protostomia 2 No
Dmo-Mir-2-P1 dmo-mir-2c MIR-2 CACAGCC None MIMAT0008652 scaffold_6540 10568108 10568173 + Arthropoda Protostomia No
Pcr-Mir-2-o159 None MIR-2 CACAGCC None None CAJQUW010002633.1 636086 636150 + P. crozeri Protostomia No 1 1
Ofu-Mir-2-o153 None MIR-2 CACAGCC None None CAIIXF020000003.1 15958470 15958526 + O. fusiformis Protostomia No 1 1
Egr-Mir-2-o136 egr-mir-2c MIR-2 CACAGCC MIMAT0020231 MIMAT0020232 APAU02000027.1 925661 925716 + E. granulosus Protostomia No 1
Sma-Mir-2-o130 sma-mir-2a MIR-2 CACAGCC MIMAT0025029 MIMAT0025030 OU426849.1 4544063 4544117 + S. mansoni Protostomia No 1
Sme-Mir-2-o129 sme-mir-2b MIR-2 CACAGCC MIMAT0003965 MIMAT0003966 NNSW01000014_dd_Smes_g4_14 3096425 3096480 + S. mediterranea Protostomia Yes 1
Llo-Mir-2-o114 V None MIR-2 CACAGCC None None OU343002.1 11598646 11598704 - Lineidae Protostomia 2 No
Pau-Mir-2-o109 None MIR-2 CACAGCC None None NMRA01000510.1 285572 285637 + P. australis Protostomia No
War-Mir-2-o93 None MIR-2 CACAGCC None None WNLI01003363.1 15447 15507 + W. argentea Protostomia No 1
Agr-Mir-2-o87 V None MIR-2 CACAGCC None None JABBOT010000080.1 1400233 1400291 + A. granulata Protostomia 2 No 1
Agr-Mir-2-o86a V None MIR-2 CACAGCC None None JABBOT010000080.1 1400008 1400066 + A. granulata Protostomia 2 No 1 1
Mom-Mir-2-o85 V None MIR-2 CACAGCC None None JARFOD010000037.1 49292 49353 + Polyplacophora Protostomia 2 No 1 1
Lhy-Mir-2-o80 None MIR-2 CACAGCC None None scaffold155753_41.9 2057 2118 - L. hyalina Protostomia No 1
Mgi-Mir-2-o56 None MIR-2 GGUCAAU None None scaffold602 445001 445057 + C. gigas Protostomia No 1
Hru-Mir-2-o55 None MIR-2 CACAGCC None None JALGQA010000019.1 17033087 17033148 + H. rufescens Protostomia No
Ovu-Mir-2-o48 V None MIR-2 CACAGCC None None RXHP01057295.1 21561 21620 - Cephalopoda Protostomia 2 No 1 1
Obi-Mir-2-o48 V None MIR-2 CACAGCC None None KQ419829 49651 49710 - Cephalopoda Protostomia 2 No 1 1
Esc-Mir-2-o48 V None MIR-2 CACAGCC None None CM044488.1 27562855 27562918 - Cephalopoda Protostomia 2 No 1 1
Npo-Mir-2-o47 None MIR-2 CACAGCC None None JACATO010000013.1 409822 409878 + Cephalopoda Protostomia Unknown 1
Ovu-Mir-2-o46 V None MIR-2 CACAGCC None None RXHP01057295.1 22936 22995 - Octopus Protostomia 2 No 1
Obi-Mir-2-o46 V None MIR-2 CACAGCC None None KQ419829 51011 51070 - Octopus Protostomia 2 No 1
Ovu-Mir-2-o45 V None MIR-2 CACAGCC None None RXHP01057295.1 23280 23340 - Cephalopoda Protostomia 2 No 1
Obi-Mir-2-o45 V None MIR-2 CACAGCC None None KQ419829 51363 51423 - Cephalopoda Protostomia 2 No 1
Esc-Mir-2-o45 V None MIR-2 CACAGCC None None CM044488.1 27565591 27565650 - Cephalopoda Protostomia 2 No 1
Npo-Mir-2-o45 None MIR-2 CACAGCC None None JACATO010000013.1 409573 409634 + Cephalopoda Protostomia Unknown 1 1
Dgr-Mir-2-o36 None MIR-2 CACAGCC None None CAJFCJ010000007.1 2552877 2552934 + D. gyrociliatus Protostomia Unknown 1 1
Cte-Mir-2-o13 cte-mir-2b MIR-2 CACAGCC None MIMAT0009504 CAPTEscaffold_933 10046 10112 + C. teleta Protostomia No 1 1

(red - mature/co-mature, blue - star)

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