MirGeneDB 3.0
71 microRNA genes with seed AGCCCUU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Cpi-Novel-1 cpi-mir-1729 CPI-NOVEL-1 AGCCCUU MIMAT0037954 MIMAT0037955 JH584702 3225755 3225811 - C. picta C. picta No 1 1
Mdo-Mir-7373-P17 mdo-mir-7374d MIR-7373 AGCCCUU MIMAT0050434 MIMAT0050435 X 44686440 44686494 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P16 mdo-mir-7374b MIR-7373 AGCCCUU MIMAT0028800 MIMAT0028801 X 44682076 44682130 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P15 None MIR-7373 AGCCCUU None None X 44680228 44680284 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P14 mdo-mir-7375c-2 MIR-7373 AGCCCUU MIMAT0050429 MIMAT0050428 X 44679658 44679714 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P13 None MIR-7373 AGCCCUU None None X 44679374 44679430 - M. domestica Marsupialia No 1
Mdo-Mir-7373-P12 mdo-mir-7375d MIR-7373 AGCCCUU MIMAT0050432 MIMAT0050433 X 44676823 44676879 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P9e None MIR-7373 AGCCCUU None None X 44679943 44679999 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P9d None MIR-7373 AGCCCUU None None X 44677961 44678017 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P9c None MIR-7373 AGCCCUU None None X 44676254 44676310 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P9b None MIR-7373 AGCCCUU None None X 44675670 44675726 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P9a None MIR-7373 AGCCCUU None None X 44675388 44675444 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P8 None MIR-7373 AGCCCUU None None X 44675103 44675159 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P7b mdo-mir-7375c-3 MIR-7373 AGCCCUU MIMAT0050429 MIMAT0050428 X 44674818 44674874 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P5g None MIR-7373 AGCCCUU None None X 44678810 44678866 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P5f None MIR-7373 AGCCCUU None None X 44678526 44678582 - M. domestica Marsupialia No
Mdo-Mir-7373-P5e None MIR-7373 AGCCCUU None None X 44677676 44677732 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P5d None MIR-7373 AGCCCUU None None X 44677391 44677447 - M. domestica Marsupialia No 1
Mdo-Mir-7373-P5c None MIR-7373 AGCCCUU None None X 44677107 44677163 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P5b None MIR-7373 AGCCCUU None None X 44673969 44674025 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P5a None MIR-7373 AGCCCUU None None X 44673685 44673741 - M. domestica Marsupialia No 1
Mdo-Mir-7373-P4b None MIR-7373 AGCCCUU None None X 44678245 44678301 - M. domestica Marsupialia No 1
Mdo-Mir-7373-P4a None MIR-7373 AGCCCUU None None X 44673401 44673457 - M. domestica Marsupialia No 1 1
Mdo-Mir-7373-P3 mdo-mir-7374a MIR-7373 AGCCCUU MIMAT0028794 MIMAT0028795 X 44670461 44670515 - M. domestica Marsupialia No 1 1
Sha-Mir-7373-o9c None MIR-7373 AGCCCUU None None GL867601.1 2082143 2082200 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o9b None MIR-7373 AGCCCUU None None GL867601.1 2081002 2081059 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o9a None MIR-7373 AGCCCUU None None GL867601.1 2081577 2081634 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8j None MIR-7373 AGCCCUU None None GL867601.1 2087091 2087148 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8i None MIR-7373 AGCCCUU None None GL867601.1 2086804 2086861 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8h None MIR-7373 AGCCCUU None None GL867601.1 2086519 2086576 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8g None MIR-7373 AGCCCUU None None GL867601.1 2086234 2086291 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8f None MIR-7373 AGCCCUU None None GL867601.1 2085945 2086002 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8e None MIR-7373 AGCCCUU None None GL867601.1 2085084 2085141 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8d2 None MIR-7373 AGCCCUU None None GL867601.1 2084520 2084577 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8d1 None MIR-7373 AGCCCUU None None GL867601.1 2085658 2085715 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8c None MIR-7373 AGCCCUU None None GL867601.1 2084243 2084300 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8b None MIR-7373 AGCCCUU None None GL867601.1 2083966 2084023 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o8a None MIR-7373 AGCCCUU None None GL867601.1 2083689 2083746 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o7 None MIR-7373 AGCCCUU None None GL867601.1 2089434 2089488 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o5 None MIR-7373 AGCCCUU None None GL867601.1 2074961 2075015 - S. harrisii Marsupialia No 1 1
Sha-Mir-7373-o4 None MIR-7373 AGCCCUU None None GL867601.1 2081864 2081918 - S. harrisii Marsupialia No 1 1
Ebu-Mir-129-P6 None MIR-129 AGCCCUU None None FYBX02009840.1 144255 144314 - E. burgeri Chordata No 1 1 1
Ebu-Mir-129-P5 None MIR-129 AGCCCUU None None FYBX02010046.1 1612329 1612390 - E. burgeri Chordata No 1 1 1
Xla-Mir-129-P4 None MIR-129 AGCCCUU None None NW_016694863.1 171079 171145 + Gnathostomata Chordata No 1
Sto-Mir-129-P4 None MIR-129 AGCCCUU None None BFAA01329546.1 110 172 - Gnathostomata Chordata No 1 1
Pbv-Mir-129-P4 pbv-mir-129b MIR-129 UUUUUGC MIMAT0038924 MIMAT0038925 KE953229.1 75187 75254 - Gnathostomata Chordata No 1
Mun-Mir-129-P4 None MIR-129 UUUUUGC None None LR594634.1 257500748 257500814 - Gnathostomata Chordata No 1
Gja-Mir-129-P4 None MIR-129 UUUUUGC None None NW_015168079.1 600525 600593 + Gnathostomata Chordata No 1
Xla-Mir-129-P2d None MIR-129 AGCCCUU None None NC_030729.1 62832864 62832929 + X. laevis Chordata No 1 1
Xla-Mir-129-P2c None MIR-129 AGCCCUU None None NC_030728.1 78252977 78253042 - X. laevis Chordata No 1 1
Gmo-Mir-129-P2b gmo-mir-129-2 MIR-129 AGCCCUU MIMAT0044203 MIMAT0044075 GeneScaffold_4104 11026 11090 + Clupeocephala Chordata No 1 1 1
Tni-Mir-129-P2a None MIR-129 AGCCCUU None None 13 4272364 4272424 + Clupeocephala Chordata No 1 1 1
Gmo-Mir-129-P2a gmo-mir-129-4 MIR-129 AGCCCUU MIMAT0044191 MIMAT0044075 GeneScaffold_2432 95798 95859 - Clupeocephala Chordata No 1 1 1
Pab-Mir-129-P2 None MIR-129 UUUUUGC None None CM054685.2 125664090 125664155 + Gnathostomata Chordata No 1 1 1
Hsa-Mir-129-P2 hsa-mir-129-1 MIR-129 UUUUUGC MIMAT0000242 MIMAT0004548 chr7 128207876 128207941 + Gnathostomata Chordata No 1 1 1
Xla-Mir-129-P1d None MIR-129 AGCCCUU None None NC_030731.1 16187756 16187820 - X. laevis Chordata No 1 1
Xla-Mir-129-P1c None MIR-129 AGCCCUU None None NC_030730.1 6936682 6936746 + X. laevis Chordata No 1 1
Tni-Mir-129-P1b None MIR-129 AGCCCUU None None 5 11469568 11469630 + Clupeocephala Chordata No 1 1 1
Gmo-Mir-129-P1b gmo-mir-129-3 MIR-129 AGCCCUU MIMAT0044074 MIMAT0044075 contig741416 75 133 - Clupeocephala Chordata No 1 1
Tni-Mir-129-P1a tni-mir-129-1 MIR-129 AGCCCUU MIMAT0003036 None 13 12882721 12882781 + Clupeocephala Chordata No 1 1 1
Gmo-Mir-129-P1a gmo-mir-129-1 MIR-129 AGCCCUU MIMAT0044203 MIMAT0044075 GeneScaffold_2632 72857 72921 + Clupeocephala Chordata No 1 1 1
Pbv-Mir-129-P1 None MIR-129 UUUUUGC None None KE954163.1 237650 237714 - Gnathostomata Chordata No 1 1 1
Pab-Mir-129-P1 None MIR-129 AGCCCUU None None CM054688.2 23563359 23563422 - Gnathostomata Chordata No 1 1 1
Mun-Mir-129-P1 None MIR-129 UUUUUGC None None LR594635.1 160870794 160870858 + Gnathostomata Chordata No 1 1 1
Mmu-Mir-129-P1 mmu-mir-129-2 MIR-129 UUUUUGC MIMAT0000209 MIMAT0000544 chr2 94241376 94241439 - Gnathostomata Chordata No 1 1 1
Mml-Mir-129-P1 mml-mir-129-2 MIR-129 AGCCCUU MIMAT0006185 MIMAT0031083 CM014349.1 22147870 22147933 - Gnathostomata Chordata No 1 1 1
Loc-Mir-129-P1 None MIR-129 UUUUUGC None None LG27 1174728 1174792 + Gnathostomata Chordata No 1 1 1
Hsa-Mir-129-P1 hsa-mir-129-2 MIR-129 AGCCCUU MIMAT0000242 MIMAT0004605 chr11 43581408 43581471 + Gnathostomata Chordata No 1 1 1
Gja-Mir-129-P1 None MIR-129 UUUUUGC None None NW_015172598.1 463812 463876 - Gnathostomata Chordata No 1 1 1
Ete-Mir-129-P1 None MIR-129 UUUUUGC None None JH980324 21312941 21313004 + Gnathostomata Chordata No 1 1 1
Ami-Mir-129-P1 ami-mir-129b MIR-129 UUUUUGC MIMAT0038138 MIMAT0038139 NW_017713697.1 10867520 10867584 - Gnathostomata Chordata No 1 1 1

(red - mature/co-mature, blue - star)

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