| MirGeneDB ID | Gja-Mir-129-P4 |
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| Family name |
MIR-129 (all species) |
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| Species |
Schlegels Japanese gecko (Gekko japonicus) |
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| MiRBase ID |
|
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| Paralogues |
Gja-Mir-129-P1
Gja-Mir-129-P2
|
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| Orthologues |
Aca-Mir-129-P4
Ami-Mir-129-P4
Cmi-Mir-129-P4
Lch-Mir-129-P4
Mun-Mir-129-P4
Pbv-Mir-129-P4
Spt-Mir-129-P4
Sto-Mir-129-P4
Xla-Mir-129-P4
|
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| Node of Origin (locus) |
Gnathostomata
|
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| Node of Origin (family) |
Chordata
|
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Genome context
(GCF_001447785.1_Gekko_japonicus) |
NW_015168079.1: 600525-600593 [+]
|
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| Seed |
UUUUUGC |
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Precursor
(pre-Mir +30nt flank) |
GAGAGGAGAUGAGACGGGUCUUCCCUGGGUCUUUUUGCGGUCUGGGCUUUCUGGGUCUGUCCAACCCCCGUAUCAGAAAGCCCUUACCCCAAAAAGCAUCCGGGGUUGGACGAUGGCAUCGCUGGAACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGAGGAGAUGAGACGG- U- -| C CU UGGGUCUGUCC
GUCU CCCUGGGU CUUUUUG GGU GGGCUUUC A
CAGG GGGGCCUA GAAAAAC CCA CCCGAAAG A
GCAAGGUCGCUACGGUAG UU C^ C UU ACUAUGCCCCC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Gja-Mir-129-P4_5p |
| mirBase accession | None |
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| Sequence |
0- CUUUUUGCGGUCUGGGCUUUC -21
Get sequence
|
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| Co-mature sequence |
Gja-Mir-129-P4_3p |
| mirBase accession | None |
|---|
| Sequence |
47- AAGCCCUUACCCCAAAAAGCAU -69
Get sequence
|
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