MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-129-P6

Family name MIR-129 (all species)
Seed AGCCCUU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-129-P5 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Chordata
Genome context
(Eburgeri_3)
FYBX02009840.1: 144255-144314 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCCGCUGCACGACCUGUUUUCCGCCGAUCUUUUUGCGGUCUGGGCUUGCUGUUCGUGUAAGCCAGUAAGCCCUUACCCCAAAAAGGAUCGGCGGAUGACCCGAGCAUCGAUGGGACUA
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Structure
        10          20        30         40        50         
UUUCCGCUGCACGACCU--   U         -|      C   CU        UGUUCGU 
                   GUU UCCGCCGAU CUUUUUG GGU  GGGCUUGC       \
                   CAG AGGCGGCUA GAAAAAC CCA  CCCGAAUG       G
AUCAGGGUAGCUACGAGCC   U         G^      C   UU        ACCGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
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To
Star sequence

Ebu-Mir-129-P6_5p*

mirBase accessionNone
Sequence
0- CUUUUUGCGGUCUGGGCUUGC -21
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Mature sequence

Ebu-Mir-129-P6_3p

mirBase accessionNone
Sequence
38- AAGCCCUUACCCCAAAAAGGAU -60
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