MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-26-P4

Family name MIR-26 (all species)
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-26-1
Paralogues Xtr-Mir-26-P1  Xtr-Mir-26-P2c  Xtr-Mir-26-P2d 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Neu-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr2: 138750904-138750964 [-] UCSC Ensembl
Seed UCAAGUA
Precursor
(pre-Mir +30nt flank)		 
UUGACAUUGGAAGAAAUGGCUGCUGCCUGGUUCAAGUAAUCCAGGAUAGGCUGUUUCCUCAAAGCACGGCCUACUCUUGAUUACUUGUUUCAGGAAGUAGCUCAUGUUACAUCAGCGUCCU
Get precursor sequence
Structure
        10          20        30        40        50          
UUGACAUUGGAAGAAAU--|      G     UU         C  GA      GUUUCCU 
                   GGCUGCU CCUGG  CAAGUAAUC AG  UAGGCU       \
                   UCGAUGA GGACU  GUUCAUUAG UC  AUCCGG       C
UCCUGCGACUACAUUGUAC^      A     UU         U  UC      CACGAAA 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-26-P4_5p
mirBase accessionMIMAT0003569
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
Proposed targets TargetScanVert: xtr-miR-26
Star sequence

Xtr-Mir-26-P4_3p*
mirBase accessionNone
Sequence 
39- CCUACUCUUGAUUACUUGUUUC -61
Get sequence